Evidence map›Paper›PMID 42244740›Full record

ArticlebioRxiv : the preprint server for biology2026

IDRs lead the way: Cooperativity between intrinsically disordered regions and structured interaction domains drives enrichment in transcription condensates.

Arad Abazari, Dinitha Y Caldera, Alisha Budhathoki, Ganesh Pandey, Mehdi Shafiei Aporvari, Filmon A Medhanie, Jan-Hendrik Spille

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Arad AbazariDepartment of Physics, University of Illinois Chicago, Chicago, IL 60607, USA.
Dinitha Y CalderaDepartment of Physics, University of Illinois Chicago, Chicago, IL 60607, USA.
Alisha BudhathokiDepartment of Physics, University of Illinois Chicago, Chicago, IL 60607, USA.
Ganesh PandeyDepartment of Physics, University of Illinois Chicago, Chicago, IL 60607, USA.
Mehdi Shafiei AporvariDepartment of Physics, University of Illinois Chicago, Chicago, IL 60607, USA.
Filmon A MedhanieDepartment of Physics, University of Illinois Chicago, Chicago, IL 60607, USA.
Jan-Hendrik SpilleDepartment of Physics, University of Illinois Chicago, Chicago, IL 60607, USA.

Funding

Structural and functional determinants of biomolecular condensates in transcription organizationR35GM150560 · NIGMS · UNIVERSITY OF ILLINOIS AT CHICAGO · PI Jan-Hendrik Spille · 2023 to 2026
$1.5M
NIGMS NIH HHS R35 GM150560
6 · The paper itself

Abstract

Many biomolecular condensates are thought to form through phase separation driven by weak and multivalent, non-stoichiometric interactions between intrinsically disordered protein regions (IDRs). IDRs are abundant in the transcription-related proteome. In vitro, different transcription-related IDRs coalesce into the same droplets, providing support for this IDR-centric paradigm of protein enrichment in transcription condensates in the cell nucleus. But our experiments show that IDRs are not sufficient to account for the degree of enrichment observed for full-length proteins in endogenous transcription condensates. Instead, we find a pattern in which IDRs facilitate engagement of structured interaction domains with a binding substrate. Instead, we find a pattern in which IDRs facilitate engagement of structured interaction domains with a binding substrate. Our results indicate that the role of IDRs in transcription condensates requires further investigation with tools that assess their mode of action in situ. Understanding the role of different protein domains and their interplay will also be important for interpreting biotechnological assays that utilize parts of condensate forming proteins.

Identifiers

PMID42244740
PMCPMC13232117

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.