Evidence map›Paper›PMID 42244023›Full record

ArticleEnvironmental microbiology reports2026

Polyphasic Characterization of Acetobacter indonesiensis UNPADCC 01-5 Isolated From a Traditional Fermented Food, Oncom Merah.

Yolani Syaputri, Erisa Zahra, Rianti Nur Azzahra, Annisa, Diffa Amanda Iswhara, Felice Olivia Lengkey, Syiffa Fauzia, Xiwu Jia, Asri Peni Wulandari, Ratu Safitri

Abstract read
In one paragraph

Article in Environmental microbiology reports, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Yolani SyaputriDepartment of Biology, Faculty of Mathematics and Natural Sciences, Universitas Padjadjaran, Jatinangor, West Java, Indonesia.ORCID https://orcid.org/0000-0002-1593-6093
Erisa ZahraDepartment of Biology, Faculty of Mathematics and Natural Sciences, Universitas Padjadjaran, Jatinangor, West Java, Indonesia.ORCID https://orcid.org/0009-0009-5721-8338
Rianti Nur AzzahraDepartment of Biology, Faculty of Mathematics and Natural Sciences, Universitas Padjadjaran, Jatinangor, West Java, Indonesia.ORCID https://orcid.org/0009-0007-0634-7629
AnnisaDepartment of Biology, Faculty of Mathematics and Natural Sciences, Universitas Padjadjaran, Jatinangor, West Java, Indonesia.ORCID https://orcid.org/0000-0001-6642-4349
Diffa Amanda IswharaDepartment of Biology, Faculty of Mathematics and Natural Sciences, Universitas Padjadjaran, Jatinangor, West Java, Indonesia.ORCID https://orcid.org/0009-0004-0176-0789
Felice Olivia LengkeyDepartment of Biology, Faculty of Mathematics and Natural Sciences, Universitas Padjadjaran, Jatinangor, West Java, Indonesia.ORCID https://orcid.org/0009-0001-7753-0128
Syiffa FauziaResearch Center for Chemistry, National Research and Innovation Agency of Indonesia, Jakarta, Indonesia.ORCID https://orcid.org/0000-0003-1579-2461
Xiwu JiaDepartment of Food Science and Engineering, Wuhan Polytechnic University, Wuhan, China.ORCID https://orcid.org/0000-0001-8610-0982
Asri Peni WulandariDepartment of Biology, Faculty of Mathematics and Natural Sciences, Universitas Padjadjaran, Jatinangor, West Java, Indonesia.ORCID https://orcid.org/0000-0002-8505-9188
Ratu SafitriDepartment of Biology, Faculty of Mathematics and Natural Sciences, Universitas Padjadjaran, Jatinangor, West Java, Indonesia.ORCID https://orcid.org/0000-0002-0640-1273

Funding

Hibah Internal Riset Kompetensi Dosen Unpad (RKDU)
6 · The paper itself

Abstract

Acetobacter indonesiensis UNPADCC 01-5 is a recently discovered acetic acid bacterium isolated from fermented food, oncom merah. With its current lack of polyphasic approach in classification, this study aims to provide the first morphological, physiological, biochemical and molecular analyses. These analyses are achieved by morphological and physiological characterization, Kirby-Bauer antibiotic susceptibility, biochemical profiling, gas chromatography-mass spectrometry and whole-genome sequencing (WGS). The results found that A. indonesiensis UNPADCC 01-5, a non-motile cell, is a gram-negative, short rod-shaped cell that formed cream-white colonies with 0.3-1.3 in diameter. It exhibited environmental resilience, including acid-tolerant, halotolerant and thermotolerant. Against antibiotics, it showed resistance towards chloramphenicol. Biochemical tests revealed its ability to ferment glucose, rhamnose, melibiose and arabinose, as well as to produce bioactive metabolites such as acetoin and acetic acid. WGS identified potential gene expressions associated with acetic acid production, stress tolerance, nitrogen fixation, hydrocarbon degradation and heavy-metal resistance. WGS analysis revealed no detectable genes associated with human virulence factors or pathogenic secretion systems. The results suggested that A. indonesiensis UNPADCC 01-5 from oncom merah possessed adaptive traits which, with future assessments and industrial-scale tests, hold potential as a functional/adjunct culture for acidic fermentations and a biofunctional agent.

Indexed as

AcetobacterFermented FoodsAcetic AcidAnti-Bacterial AgentsFermentationFood MicrobiologyGenome, BacterialPhylogenyWhole Genome SequencingAcetic AcidAnti-Bacterial Agentsacetic acid bacteriaAcetobacter indonesiensisfermented foodsoncom merahprobiotic potential

Identifiers

PMID42244023
PMCPMC13238706

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.