Evidence map›Paper›PMID 42239435›Full record

ArticlebioRxiv : the preprint server for biology2026

A Deterministically Synchronized Widefield Imaging and Virtual Reality Platform for Multimodal Brain-Behavior Recording.

Miguel Maldonado, Omer Faruk Dinc, Macit Emre Lacin, Tenesha Connor, Frederick Bell, Berfin Dinc, Kemal Ozdemirli, Murat Yildirim

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Miguel MaldonadoCleveland Clinic Research, Department of Neuroscience, Cleveland, USA.
Omer Faruk DincCleveland Clinic Research, Department of Neuroscience, Cleveland, USA.
Macit Emre LacinCleveland Clinic Research, Department of Neuroscience, Cleveland, USA.ORCID 0000-0002-6131-4842
Tenesha ConnorCleveland Clinic Research, Department of Neuroscience, Cleveland, USA.ORCID 0009-0008-2235-704X
Frederick BellCleveland Clinic Research, Department of Neuroscience, Cleveland, USA.
Berfin DincCleveland Clinic Research, Department of Neuroscience, Cleveland, USA.
Kemal OzdemirliCleveland Clinic Research, Department of Neuroscience, Cleveland, USA.ORCID 0009-0005-9826-8308
Murat YildirimCleveland Clinic Research, Department of Neuroscience, Cleveland, USA.

Funding

Developing next generation multiphoton systems to reveal cortico-thalamic interactions underlying short-term memory in behaving miceR00EB027706 · NIBIB · CLEVELAND CLINIC LERNER COM-CWRU · PI YILDIRIM, MURAT · 2022 to 2024
$747k
NIBIB NIH HHS R00 EB027706
6 · The paper itself

Abstract

Objective: Simultaneous recording of brain activity, behaviour, and virtual environments is essential for understanding large-scale neural dynamics during behaviour. However, existing systems often rely on software-based synchronization or post hoc alignment, introducing latency, jitter, and drift that obscure fast brain-behavior interactions. Approach: Here, we present a deterministically synchronized widefield calcium imaging platform that unifies neural imaging, high-speed behavioural monitoring, and closed-loop virtual reality (VR) under a shared hardware-defined clock. This system enables millisecond-precision temporal alignment across modalities, including dual-wavelength hemodynamic correction, pupil and orofacial tracking, locomotion sensing, and VR rendering. Main results: The platform achieves stable hardware-level synchronization across neural imaging, behavioural recordings, and VR rendering without reliance on software timestamps. It supports widefield imaging rates up to 100 Hz and integrates seamlessly with both ViRMEn and Blender VR engines, exhibiting a mean locomotion-to-VR update latency of ~1.5 ms. Multimodal recordings during VR navigation demonstrate robust temporal alignment between cortical activity, facial dynamics, pupil signals, and locomotion. Significance: This system provides a deterministic multimodal framework for studying brain-behaviour relationships during active behaviour. By enabling millisecond-precision synchronization across neural imaging, behaviour, and virtual environments, this platform enables causal investigation of brain-behaviour interactions at millisecond precision and provides a foundation for next-generation closed-loop neuroengineering experiments.

Indexed as

Brain–behavior couplingClosed-loop behaviorHead-fixed mouseMesoscale cortical dynamicsVirtual realityWidefield calcium imaging

Identifiers

PMID42239435
PMCPMC13228286

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.