Evidence map›Paper›PMID 42239340›Full record

ArticlebioRxiv : the preprint server for biology2026

Nucleolar Dynamics During Oogenesis.

Ruoyu Li, Grace McKown, Dai Tsuchiya, Mark Mattingly, Anna Galligos, Michay Diez, Jui Feng Lu, Mary C McKinney, Sean McKinney, Boris Rubinstein and 7 more

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Ruoyu LiStowers Institute for Medical Research.
Grace McKownStowers Institute for Medical Research.ORCID 0009-0007-2168-6071
Dai TsuchiyaStowers Institute for Medical Research.
Mark MattinglyStowers Institute for Medical Research.ORCID 0009-0000-6139-9789
Anna GalligosStowers Institute for Medical Research.
Michay DiezStowers Institute for Medical Research.
Jui Feng LuStowers Institute for Medical Research.
Mary C McKinneyStowers Institute for Medical Research.
Sean McKinneyStowers Institute for Medical Research.ORCID 0000-0002-9740-6247
Boris RubinsteinStowers Institute for Medical Research.ORCID 0000-0002-0404-3695
Timothy J CorbinStowers Institute for Medical Research.
Melainia McClainStowers Institute for Medical Research.
Carrie CarmichaelStowers Institute for Medical Research.
Victoria A HassebroekStowers Institute for Medical Research.
Stephanie H NowotarskiStowers Institute for Medical Research.ORCID 0000-0003-2569-1939
Jennifer L GertonStowers Institute for Medical Research.ORCID 0000-0003-0743-3637
Kamena K KostovaStowers Institute for Medical Research.ORCID 0000-0001-9973-401X

Funding

Oocyte genomic instability as a driver of the aging ovarian innate immune responseR01HD105752 · NICHD · NORTHWESTERN UNIVERSITY AT CHICAGO · PI DUNCAN, FRANCESCA E., GERTON, JENNIFER L · 2021 to 2025
$2.4M
Investigating ribosome biogenesis and function in the aging mammalian oocyte.F31HD116553 · NICHD · STOWERS INSTITUTE FOR MEDICAL RESEARCH · PI Anna Galligos · 2024 to 2026
$67k
NICHD NIH HHS F31 HD116553NICHD NIH HHS R01 HD105752
6 · The paper itself

Abstract

Ribosome biogenesis is a conserved and highly regulated process that starts in the nucleolus, a membrane-less multi-phase organelle. Although the architecture of the nucleolus is known to change due to perturbations, how nucleolar organization is modulated during physiological processes to meet changing translational demands remains unclear. Here, we use zebrafish oogenesis as a developmental context requiring a rapid expansion of translational capacity to investigate the regulation of nucleolar architecture. We show nucleoli undergo coordinated changes in number, size, subnuclear localization, and layering throughout oogenesis. We further demonstrate that nucleoli form around extrachromosomal DNA circles that contain the rDNA locus. Notably, mouse oocytes undergo similar developmental changes in nucleolar layering and phase organization, indicating that remodeling of nucleolar condensates is a conserved feature of oogenesis. These findings reveal previously unexplored regulation of nucleolar architecture as developmental adaptations to changing biosynthetic needs.

Identifiers

PMID42239340
PMCPMC13228488

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.