Evidence map›Paper›PMID 42239242›Full record

ArticlebioRxiv : the preprint server for biology2026

Discovery of a sulfotyrosine-motif in the human TrkB extracellular domain required for agonist activation.

David C Briggs, Ryan T Duffy, Sarah Ateaque, Sarah Maslen, Hema Nagaraj, Yves-Alain Barde, Peter S DiStefano, Ronald M Lindsay, Paul C Armstrong, Chloe J Peach and 1 more

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

David C BriggsSignalling and Structural Biology Lab, The Francis Crick Institute, London, UK.ORCID 0000-0002-9793-7339
Ryan T DuffyCentre of Membrane Proteins and Receptors (COMPARE), University of Nottingham, Nottingham, UK.
Sarah AteaqueSchool of Biosciences, Cardiff University, Cardiff, Wales, UK.
Sarah MaslenProteomics STP, The Francis Crick Institute, London, UK.
Hema NagarajChemical Biology STP, The Francis Crick Institute, London, UK.
Yves-Alain BardeSchool of Biosciences, Cardiff University, Cardiff, Wales, UK.ORCID 0000-0002-7627-461X
Peter S DiStefanoZebra Biologics Inc, 1014 Old Marlboro Road, Concord, Massachusetts 01742, USA.ORCID 0009-0000-9042-2589
Ronald M LindsayZebra Biologics Inc, 1014 Old Marlboro Road, Concord, Massachusetts 01742, USA.ORCID 0000-0001-8377-5079
Paul C ArmstrongBlizard Institute, The Faculty of Medicine and Dentistry, Queen Mary University of London, The Blizard Building, 4 Newark Street, London E1 2AT, UK.ORCID 0000-0003-0904-677X
Chloe J PeachCentre of Membrane Proteins and Receptors (COMPARE), University of Nottingham, Nottingham, UK.ORCID 0000-0001-6315-1170
Neil Q McDonaldSignalling and Structural Biology Lab, The Francis Crick Institute, London, UK.ORCID 0000-0003-0975-6325

Funding

Treatment of diabetic retinopathy with TrkB agonist antibodiesR41EY032011 · NEI · ZEBRA BIOLOGICS, INC. · PI DISTEFANO, PETER S, FORT, PATRICE E. · 2020 to 2020
$211k
NEI NIH HHS R41 EY032011Wellcome Trust CC2068
6 · The paper itself

Abstract

The brain-derived neurotrophic factor (BDNF)-tropomyosin receptor kinase B (TrkB) signalling axis is a key effector of synaptic plasticity and neuroprotection. While TrkB activation is a major objective towards preventing dysfunction of the nervous system, it cannot be reached with exogenous BDNF administration given the unfavourable physiochemical properties of BDNF. In addition, BDNF also activates a tumour necrosis factor pathway by binding to the neurotrophin receptor p75. The TrkB agonist ZEB85 provides an alternative route to the selective activation of TrkB. We report here the structural basis for the interaction between human TrkB, and both ZEB85 and BDNF, and reveal that a sulfated tyrosine modification is indispensable for ZEB85 activation of TrkB signalling. Using structure-guided BDNF- and ZEB85-binding deficient TrkB mutants , we assessed their ability to sequester ligands from full-length TrkB in cultured human neurons. We found that the BDNF binding site extends into the extracellular juxtamembrane domain of TrkB but does not require the sulfotyrosine at residue 400 to activate TrkB. Together with biophysical analysis and AlphaFold modelling these results also explain how BDNF can displace ZEB85 from TrkB through an overlapping epitope. Our findings reveal unique features of TrkB, not present in the related neurotrophin receptors TrkA and TrkC, and suggest new directions to explore the role of sulfotyrosine in TrkB signalling and identify new TrkB-specific protein ligands.

Identifiers

PMID42239242
PMCPMC13228283

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.