Evidence map›Paper›PMID 42234214›Full record

ArticleBiomechanics and modeling in mechanobiology2026

Sparse polynomial surrogates for F-actin networks with compliant crosslinkers.

Luís Pacheco, Marco Parente, João Ferreira

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Article in Biomechanics and modeling in mechanobiology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

3 authors.

Luís PachecoDepartment of Mechanical Engineering, Faculty of Engineering, University of Porto, R. Dr. Roberto Frias, 4200-465, Porto, Portugal. lrpacheco@fe.up.pt.
Marco ParenteDepartment of Mechanical Engineering, Faculty of Engineering, University of Porto, R. Dr. Roberto Frias, 4200-465, Porto, Portugal.
João FerreiraDepartment of Mechanical Engineering, Faculty of Engineering, University of Porto, R. Dr. Roberto Frias, 4200-465, Porto, Portugal.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Filamentous actin (F-actin) constitutes the primary contributor to cell elasticity and structural integrity, forming dynamic, crosslinked networks in the actin cortex. Existing mechanical models for F-actin and crosslinked filament networks successfully describe filament- and network-level behavior, but are often limited in accounting for biological dynamic processes and inherent material uncertainty and variability. We develop a stochastic modeling framework that integrates Polynomial Chaos Expansion (PCE) surrogates using the Finite Element Method (FEM). These surrogates replace filament-scale equations for compliant crosslinked F-actin networks, efficiently enabling uncertainty quantification and sensitivity analysis of key material parameters. The first and second statistical moments from the PCE are incorporated into a micro-sphere network model and implemented via a user-defined material subroutine. Validation was performed against 10 000 Monte Carlo simulations (MCS) for each of four FEM test cases: three simple deformation modes applied to a unit length cubic element, and a thin gel layer under shear mimicking a parallel plate rheology setup. In every test, the surrogate predicts the expected value of relevant stress quantities at maximum deformation with under 1% relative error versus the MCS reference. Moreover, the surrogate captures the network's variability as measured by second-order moments, demonstrating its ability to deliver rapid, statistically faithful predictions of both mean response and standard deviation in simple element tests and experimentally relevant rheology geometries. The proposed methodology provides a scalable route for incorporating intrinsic material variability into F-actin mechanical modeling, with implications for studying cell motility, division, and pathologies related to cytoskeletal remodeling.

Indexed as

ActinsCross-Linking ReagentsAnimalsComputer SimulationElasticityFinite Element AnalysisModels, BiologicalMonte Carlo MethodStochastic ProcessesStress, MechanicalActinsCross-Linking ReagentsActin networksContinuum mechanicsFinite elementsSparse polynomial chaos expansionsUncertainty quantification

Identifiers

PMID42234214
PMCPMC13234050

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LicenceCC BY
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.