Evidence map›Paper›PMID 42216100›Full record

ArticleBiotechnology for biofuels and bioproducts2026

Light quality rewires module-trait networks in Euglena gracilis to drive carotenoid and paramylon accumulation.

Ming Du, Zixi Chen, Qingqing Guo, Jing Liu, Ke Xu, Tianming Chen, Chao Li, Yanling Li, Jiangxin Wang

Abstract read
In one paragraph

Article in Biotechnology for biofuels and bioproducts, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Ming DuInstitute for Ecological Research and Pollution Control of Plateau Lakes, School of Ecology and Environmental Science, Yunnan University, Kunming, 650500, Yunnan, China.
Zixi ChenShenzhen Key Laboratory of Marine Bioresource and Eco-Environmental Science, Shenzhen Engineering Laboratory for Marine Algal Biotechnology, Guangdong Provincial Key Laboratory for Plant Epigenetics, College of Life Sciences and Oceanography, Shenzhen University, Shenzh en, 518060, China.
Qingqing GuoShenzhen Bay Laboratory, Shenzhen, 518055, China.
Jing LiuShenzhen Bay Laboratory, Shenzhen, 518055, China.
Ke XuShenzhen Key Laboratory of Marine Bioresource and Eco-Environmental Science, Shenzhen Engineering Laboratory for Marine Algal Biotechnology, Guangdong Provincial Key Laboratory for Plant Epigenetics, College of Life Sciences and Oceanography, Shenzhen University, Shenzh en, 518060, China.
Tianming ChenShenzhen Key Laboratory of Marine Bioresource and Eco-Environmental Science, Shenzhen Engineering Laboratory for Marine Algal Biotechnology, Guangdong Provincial Key Laboratory for Plant Epigenetics, College of Life Sciences and Oceanography, Shenzhen University, Shenzh en, 518060, China.
Chao LiShenzhen Key Laboratory of Marine Bioresource and Eco-Environmental Science, Shenzhen Engineering Laboratory for Marine Algal Biotechnology, Guangdong Provincial Key Laboratory for Plant Epigenetics, College of Life Sciences and Oceanography, Shenzhen University, Shenzh en, 518060, China.
Yanling LiInstitute for Ecological Research and Pollution Control of Plateau Lakes, School of Ecology and Environmental Science, Yunnan University, Kunming, 650500, Yunnan, China. yanlingli@ynu.edu.cn.
Jiangxin WangShenzhen Key Laboratory of Marine Bioresource and Eco-Environmental Science, Shenzhen Engineering Laboratory for Marine Algal Biotechnology, Guangdong Provincial Key Laboratory for Plant Epigenetics, College of Life Sciences and Oceanography, Shenzhen University, Shenzh en, 518060, China. jxwang@szu.edu.cn.

Funding

National Key Research and Development Program of China 2021YFA0910800National Natural Science Foundation of China 41876188
6 · The paper itself

Abstract

backgroundLight quality is a critical and tractable parameter for directing carbon partitioning in microalgae toward the synthesis of high-value bioproducts. In this study, Euglena gracilis was employed as a model photosynthetic system to investigate spectral regulation of bioproduct accumulation. An integrative approach combining physiological measurements, quantification of major bioproducts (including chlorophylls, carotenoids, lipids, protein, and the β-1,3-glucan paramylon), and RNA-sequencing-based weighted gene co-expression network analysis (WGCNA) was used to dissect spectrum-specific regulatory programs.

resultsDistinct spectral treatments induced divergent photochemical responses (Fv/Fm) and bioproduct profiles. WGCNA identified 12 transcriptional modules, which were correlated with specific traits and treatments using module eigengene analysis. One module, enriched in carotenoid biosynthesis genes, showed a strong positive correlation with total carotenoid content (r ≈ 0.85, p < 0.001). A separate module associated with photosystem function and photoprotection closely tracked changes in Fv/Fm (r ≈ 0.75, p ≈ 0.03). Notably, a third module responsive to blue-light-dominant conditions displayed positive correlations with chlorophyll a, carotenoids, and paramylon (|r| ≈ 0.74-0.79; p < 0.05), suggesting an integrated regulatory axis linking light perception, photosynthetic performance, and carbon storage. Additional modules correlated with protein accumulation and broad-spectrum (white) light exposure, implicating coordinated regulation of translational capacity and cytoskeletal dynamics.

conclusionsCollectively, these module-trait associations elucidate how light quality orchestrates plastidial function, redox homeostasis, isoprenoid biosynthesis, and β-1,3-glucan metabolism to reprogram bioproduct yields. This network framework identifies candidate pathway regulators and provides strategic insights for optimizing spectral conditions to enhance carotenoid and paramylon production in E. gracilis, supporting advanced microalgal biorefinery development.

Indexed as

CarotenoidsEuglena gracilisLight qualityMicroalgal bioproductsModule–trait associationParamylonPhotochemistry (Fv/Fm)WGCNA

Identifiers

PMID42216100
PMCPMC13422297

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.