Evidence map›Paper›PMID 42204378›Full record

ArticlePlant, cell & environment2026

Endophyte Bacillus sp. RE35 Enhances Cd Trap in Rice Roots Via Root Cell Wall Remodelling During Colonisation.

Wei Chen, Yixin Wu, Yan Gao, Bo Wang, Gaoling Shi, Yuntao Li, Shen Xu, Xiafang Sheng, Lizhu Liu

Abstract read
In one paragraph

Article in Plant, cell & environment, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Wei ChenInstitute of Agricultural Resources and Environment, Jiangsu Academy of Agricultural Sciences, Nanjing, Jiangsu, China.ORCID https://orcid.org/0000-0002-3677-5516
Yixin WuInstitute of Agricultural Resources and Environment, Jiangsu Academy of Agricultural Sciences, Nanjing, Jiangsu, China.ORCID https://orcid.org/0000-0002-5095-6663
Yan GaoInstitute of Agricultural Resources and Environment, Jiangsu Academy of Agricultural Sciences, Nanjing, Jiangsu, China.
Bo WangInstitute of Agricultural Resources and Environment, Jiangsu Academy of Agricultural Sciences, Nanjing, Jiangsu, China.
Gaoling ShiInstitute of Agricultural Resources and Environment, Jiangsu Academy of Agricultural Sciences, Nanjing, Jiangsu, China.
Yuntao LiInstitute of Agricultural Resources and Environment, Jiangsu Academy of Agricultural Sciences, Nanjing, Jiangsu, China.
Shen XuInstitute of Agricultural Resources and Environment, Jiangsu Academy of Agricultural Sciences, Nanjing, Jiangsu, China.
Xiafang ShengCollege of Life Sciences, Nanjing Agricultural University, Nanjing, Jiangsu, China.
Lizhu LiuInstitute of Agricultural Resources and Environment, Jiangsu Academy of Agricultural Sciences, Nanjing, Jiangsu, China.

Funding

Jiangsu Agricultural Science and Technology Innovation Fund CX(24)1001National Natural Science Foundation of China 32201385National Natural Science Foundation of China 42577018
6 · The paper itself

Abstract

Cadmium (Cd) accumulation in rice poses a significant threat to food safety and human health. Plant growth-promoting endophytes (PGPEs) offer a promising strategy to mitigate Cd stress. Yet, the mechanisms underlying microbe-mediated reduction of Cd uptake, particularly through specific plant-microbe interactions, remain poorly understood. Here, we demonstrate that the root endophyte Bacillus sp. RE35, a Cd-tolerant and high-IAA producer isolated from rice, established an effective apoplastic niche and significantly enhanced Cd retention in roots through a multi-level mechanism. Successful colonisation of RE35 in the root apoplast, confirmed by the red fluorescent protein labelling, strain-specific gene quantification and colonisation-related genes analysis, promoted extensive root morphological remodelling via both de novo and salvage pathways of IAA biosynthesis under Cd stress. Notably, RE35 inoculation drastically reshaped Cd distribution, increasing cell wall-bound Cd by 64.7% while reducing shoot Cd accumulation by 24.1%-49.7%. This enhanced apoplastic trapping of Cd was attributed to a comprehensive cell wall remodelling program, activated through RE35-induced expression of plant receptor kinases (e.g., LRR-RLKs, LysM-RLKs) and the upregulation of key genes involved in the biosynthesis of pectin, hemicellulose and lignin. In parallel, RE35 modulated host Cd transport by downregulating influx transporter genes (OsNRAMP5, OsZIP5/9) and upregulating the vacuolar sequestration gene OsHMA3. Our findings reveal a Cd-responsive regulatory network where endophytes enhance apoplastic immobilisation by coordinating auxin signalling, receptor kinase activation and cell wall remodelling, providing a mechanistic basis for sustainable agriculture in contaminated environments.

Indexed as

BacillusCadmiumCell WallEndophytesOryzaPlant RootsIndoleacetic AcidsCadmiumIndoleacetic Acidsauxincadmiumcadmium sequestrationcell wall remodellinggrowth‐promoting endophyte

Identifiers

PMID42204378
PMCPMC13436543

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.