Evidence map›Paper›PMID 42201425›Full record

ArticleMolecular biology reports2026

Biological activity of serine-proline dipeptide to Enterobacteriaceae bacteria.

Hirofumi Shimomura, Kiyofumi Wanibuchi, Minori Tsuyuguchi, Mitsuru Shoji, Shunji Hayashi

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Article in Molecular biology reports, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

5 authors.

Hirofumi ShimomuraDepartment of Microbiology, School of Medicine, Kitasato University, 1-15-1, Kitasato, Minami-ku, Sagamihara-shi, 252- 0374, Kanagawa, Japan. shimomura.hirofumi@kitasato-u.ac.jp.
Kiyofumi WanibuchiFaculty of Pharmaceutical Sciences, Yokohama University of Pharmacy, 601, Matano-cho, Totsuka-ku, Yokohama-shi, 245-0066, Kanagawa, Japan.
Minori TsuyuguchiFaculty of Pharmaceutical Sciences, Yokohama University of Pharmacy, 601, Matano-cho, Totsuka-ku, Yokohama-shi, 245-0066, Kanagawa, Japan.
Mitsuru ShojiFaculty of Pharmaceutical Sciences, Yokohama University of Pharmacy, 601, Matano-cho, Totsuka-ku, Yokohama-shi, 245-0066, Kanagawa, Japan.
Shunji HayashiDepartment of Microbiology, School of Medicine, Kitasato University, 1-15-1, Kitasato, Minami-ku, Sagamihara-shi, 252- 0374, Kanagawa, Japan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundSome dipeptides function as bioactive substances to prevent the illness such as hypertension and dementia. However, almost no dipeptides are known to directly contribute to prevention of bacterial infection. METHODS AND

resultsWe examined the antibacterial activity of dipeptides to six species of Gram-negative bacteria and a Gram-positive bacterium by the colony-forming units measurement and found that serine-proline dipeptide acts as an antibacterial agent selective on Enterobacteriaceae bacteria. In the microscopic observation of purified peptidoglycan particles, serine-proline dipeptide selectively disrupted Gram-negative bacterium-type peptidoglycan particles. In the protein analysis, serine-proline dipeptide induced hypertrophy of the bacterial cell bodies of an Enterobacteriaceae bacterium Klebsiella pneumoniae and caused the leakage of proteins from the bacterial cells. On the contrary, proline-serine dipeptide had no influence on the survival of all bacterial species examined. Apart from this, serine-proline dipeptide turned out to elicit the antibacterial ability of an antibiotic polymyxin B to Enterobacteriaceae bacteria. Meanwhile, proline-serine dipeptide inhibited the antibacterial action of polymyxin B on Enterobacteriaceae bacteria. In the molecular dynamics calculation, serine-proline dipeptide molecules integrated around a polymyxin B molecule and retained the stretched conformation of polymyxin B molecule. Meanwhile, a proline-serine dipeptide molecule interacted with joint moiety between the ring and linear structures of polymyxin B molecule and retained the folded conformation of its molecule. In sum, active and inactive forms of polymyxin B on Enterobacteriaceae bacteria were suggested to take the stretched and folded conformations, respectively.

conclusionsSerine-proline dipeptide may be beneficial to prevention of Enterobacteriaceae bacterial infection.

Indexed as

Anti-Bacterial AgentsDipeptidesEnterobacteriaceaeKlebsiella pneumoniaeMicrobial Sensitivity TestsMolecular Dynamics SimulationPeptidoglycanProlineSerineAnti-Bacterial AgentsDipeptidesPeptidoglycanProlineSerineDipeptideEnterobacteriaceaePeptidoglycanPolymyxin BProlineSerine

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.