Evidence map›Paper›PMID 42201168›Full record

ArticleMethods and protocols2026

Comparative Evaluation of Methods of DNA Extraction from Cryopreserved Bovine Semen for Molecular Diagnostic Applications.

Carlos A Ramos-Jonapá, Lily X Zelaya-Molina, Luis Felipe Guzmán, Edgar I González-Jiménez, David Urbán-Duarte, Horacio Álvarez-Gallardo, Francisco J Padilla-Ramírez

Abstract read
In one paragraph

Article in Methods and protocols, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Carlos A Ramos-JonapáDepartment of MIPPE, Universidad de Guadalajara, CUCBA Campus, Sistema de Postgrado, Camino Ing. Ramón Padilla Sánchez, 2100 Predio Las Agujas, Zapopan 45200, Jalisco, Mexico.ORCID 0009-0001-5752-058X
Lily X Zelaya-MolinaCentro Nacional de Recursos Genéticos-INIFAP, Av. Biodiversidad 2498, Tepatitlan de Morelos 47600, Jalisco, Mexico.ORCID 0000-0002-3474-3289
Luis Felipe GuzmánCentro Nacional de Recursos Genéticos-INIFAP, Av. Biodiversidad 2498, Tepatitlan de Morelos 47600, Jalisco, Mexico.ORCID 0000-0002-1663-3457
Edgar I González-JiménezCentro Experimental Tecomán-INIFAP, Carretera Colima-Manzanillo, km 35, Tecomán 28930, Colima, Mexico.ORCID 0000-0002-3095-6869
David Urbán-DuarteCentro Nacional de Recursos Genéticos-INIFAP, Av. Biodiversidad 2498, Tepatitlan de Morelos 47600, Jalisco, Mexico.ORCID 0000-0003-0820-8052
Horacio Álvarez-GallardoCentro Nacional de Recursos Genéticos-INIFAP, Av. Biodiversidad 2498, Tepatitlan de Morelos 47600, Jalisco, Mexico.ORCID 0000-0002-7200-8912
Francisco J Padilla-RamírezDepartment of MIPPE, Universidad de Guadalajara, CUCBA Campus, Sistema de Postgrado, Camino Ing. Ramón Padilla Sánchez, 2100 Predio Las Agujas, Zapopan 45200, Jalisco, Mexico.

Funding

INIFAP 12443434025
6 · The paper itself

Abstract

Cryopreserved bovine semen represents an accessible source of genetic material due to its widespread use in assisted reproductive technologies and the conservation of genetically valuable animals. However, DNA extraction from spermatozoa within this type of sample remains challenging due to the high protein content and the complex structure of the ejaculate, which can affect DNA yield and quality. The aim of this study was to identify and validate an efficient method for obtaining high-quality DNA from spermatozoa present in cryopreserved bovine semen for molecular diagnostic applications. Five DNA extraction protocols were evaluated: TRIzol™, MagMax™ Nucleic Acid Purification Kit, Rapid DNA™ Fecal/Soil Microbe Kit, a conventional phenol-chloroform protocol, and a modified phenol-chloroform-isoamyl alcohol protocol. All extracted genetic material was assessed by spectrophotometry (concentration and purity), and DNA integrity was evaluated by agarose gel electrophoresis. Statistical analysis revealed significant differences in DNA concentration among extraction methods (Friedman test, χ

Indexed as

bovine semenDNA extractionmolecular diagnosticsreproductive biotechnologysemen cryopreservation

Identifiers

PMID42201168
PMCPMC13214769

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.