Evidence map›Paper›PMID 42194985›Full record

ArticleGenes2026

Genetic Characterization and Population Structure of Mozambique's Sesame (

Winfred Nthamo Muteti, Rogerio Marcos Chiulele, Wilfred Abincha

Abstract read
In one paragraph

Article in Genes, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

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2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Winfred Nthamo MutetiDepartment of Crop Production, Faculty of Agronomy and Forest Engineering, Eduardo Mondlane University, 3453 Avenida Julius Nyerere, Maputo P.O. Box 257, Mozambique.ORCID 0009-0006-9147-7278
Rogerio Marcos ChiuleleDepartment of Crop Production, Faculty of Agronomy and Forest Engineering, Eduardo Mondlane University, 3453 Avenida Julius Nyerere, Maputo P.O. Box 257, Mozambique.
Wilfred AbinchaDepartment of Research and Development, Kentegra Biotechnology Holdings LLC, Nairobi P.O. Box 566-00502, Kenya.ORCID 0000-0003-1605-8760

Funding

the Centre of Excellence in Agri-Food Systems and Nutrition (CE-AFSN) of Eduardo Mondlane University, Mozambique E089-MZ
6 · The paper itself

Abstract

BACKGROUND/

objectiveSesame (

methodsThe generated 14,763 SNPs were filtered, retaining 11,502 high-quality SNPs for this study.

resultsOverall genetic diversity was moderate (mean He = 0.30, Ho = 0.30, MAF = 0.21, PIC = 0.25). Population structure analysis using sparse non-negative matrix factorization identified eight subpopulations, consistent with principal component analysis implemented via the Latent factor mixed model. Discriminant analysis of principal components (DAPC) and Ward's hierarchical clustering based on Nei's distance resolved the same eight clusters, although DAPC revealed overlap among clusters, consistent with extensive admixture. Analysis of molecular variance showed that 85.85% of total molecular variation was within subpopulations and 14.15% among the subpopulations. Pairwise fixation indices (ranging from 0.02 to 0.10) identified divergent subpopulations 7 and 1 as suitable candidates for hybridization. Within subpopulations, observed heterozygosity exceeded expected heterozygosity, likely reflecting residual heterozygosity in sesame landraces, admixture, reverse Wahlund effect and scoring of paralogs as heterozygous SNPs.

conclusionsOverall, this study provided insights into sesame's genetic diversity in Mozambique, contributing to germplasm conservation and informed parental selection.

Indexed as

Polymorphism, Single NucleotideSesamumGenetics, PopulationGenetic VariationMozambiquePrincipal Component Analysiscluster analysisDAPCDArTseqgenetic diversitygenotyping-by-sequencing (GBS)Mozambiquenext-generation sequencing (NGS)population structureSesamum indicumSNPs

Identifiers

PMID42194985
PMCPMC13205522

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.