Evidence map›Paper›PMID 42194972›Full record

ArticleGenes2026

Detection of Gene Fusions in Soft Tissue Sarcoma Using Next-Generation Sequencing.

Piotr Remiszewski, Klaudia Bobak, Jakub Piątkowski, Paweł Golik, Andrzej Tysarowski, Katarzyna Seliga, Mateusz J Spałek, Anna Szumera-Ciećkiewicz, Michał Wągrodzki, Piotr Rutkowski and 1 more

Registry-linked trialAbstract read
In one paragraph

Article in Genes, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT03651375 (Hypofractionated 5x5 Gy Radiotherapy With Sequential Doxorubicin and Ifosfamide-based Chemotherapy in Marginally Resectable Soft Tissue Sarcomas of Extremities or Trunk Wall), which is not on this map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT03651375 phase2unknown statusnot on this map

Hypofractionated 5x5 Gy Radiotherapy With Sequential Doxorubicin and Ifosfamide-based Chemotherapy in Marginally Resectable Soft Tissue Sarcomas of Extremities or Trunk Wall

TypeinterventionalSponsorMaria Sklodowska-Curie National Research Institute of OncologyRan2017 to 2022Enrolled46ConditionsSarcoma, Fibrosarcoma, Leiomyosarcoma, LiposarcomaArmsSequential chemotherapy - 3 courses of AI, Hypofractionated radiotherapy
3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Piotr RemiszewskiDepartment of Soft Tissue/Bone Sarcoma and Melanoma, Maria Sklodowska-Curie National Research Institute of Oncology, 00-001 Warsaw, Poland.ORCID 0009-0002-5170-6348
Klaudia BobakDepartment of Soft Tissue/Bone Sarcoma and Melanoma, Maria Sklodowska-Curie National Research Institute of Oncology, 00-001 Warsaw, Poland.
Jakub PiątkowskiFaculty of Biology, Institute of Genetics and Biotechnology, University of Warsaw, 02-091 Warsaw, Poland.
Paweł GolikFaculty of Biology, Institute of Genetics and Biotechnology, University of Warsaw, 02-091 Warsaw, Poland.
Andrzej TysarowskiCancer Molecular and Genetic Diagnostics Laboratory, Maria Sklodowska-Curie National Research Institute of Oncology, 00-001 Warsaw, Poland.
Katarzyna SeligaCancer Molecular and Genetic Diagnostics Laboratory, Maria Sklodowska-Curie National Research Institute of Oncology, 00-001 Warsaw, Poland.
Mateusz J SpałekDepartment of Soft Tissue/Bone Sarcoma and Melanoma, Maria Sklodowska-Curie National Research Institute of Oncology, 00-001 Warsaw, Poland.ORCID 0000-0002-3960-7673
Anna Szumera-CiećkiewiczDepartment of Pathology, Maria Sklodowska-Curie National Research Institute of Oncology, 00-001 Warsaw, Poland.
Michał WągrodzkiDepartment of Pathology, Maria Sklodowska-Curie National Research Institute of Oncology, 00-001 Warsaw, Poland.
Piotr RutkowskiDepartment of Soft Tissue/Bone Sarcoma and Melanoma, Maria Sklodowska-Curie National Research Institute of Oncology, 00-001 Warsaw, Poland.ORCID 0000-0002-8920-5429
Anna M CzarneckaDepartment of Soft Tissue/Bone Sarcoma and Melanoma, Maria Sklodowska-Curie National Research Institute of Oncology, 00-001 Warsaw, Poland.ORCID 0000-0002-2107-3810

Funding

National Science Centre 2019/35/O/NZ2/03761
6 · The paper itself

Abstract

introductionSoft tissue sarcomas (STS) exhibit profound molecular heterogeneity. While recurrent gene fusions hold significant diagnostic and therapeutic value-guiding treatment selection and identifying novel molecular targets-our understanding of their broader clinical implications remains limited. MATERIALS AND

methodsWe performed next-generation sequencing (NGS; FusionPlex Sarcoma v2, Archer™) and bioinformatic analysis (STAR v.2.7, Arriba) on formalin-fixed paraffin-embedded (FFPE) core needle biopsy specimens. The cohort consisted of patients enrolled in a phase II clinical trial (NCT03651375) who received preoperative chemoradiotherapy according to the UNRESARC protocol.

resultsThe analysed cohort comprised nine adult patients (median age 66 years; range 44-73) diagnosed with undifferentiated pleomorphic sarcoma (UPS;

conclusionsOur analysis suggests that broad genomic profiling may provide complementary molecular information in diagnostically challenging cases managed at specialised sarcoma centres, particularly when morphology and immunohistochemistry are insufficient. In the present series, however, the detected rearrangements did not alter systemic treatment, and the data do not support claims of prognostic, predictive, or therapeutic actionability.

Indexed as

Gene FusionHigh-Throughput Nucleotide SequencingOncogene Proteins, FusionSarcomaAdultAgedClinical Trials, Phase II as TopicFemaleHumansMaleMiddle AgedOncogene Proteins, Fusionchemotherapy responsegene fusionsmolecular targetsreal-worldsarcoma geneticstherapeutic targets

Identifiers

PMID42194972
PMCPMC13206013

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.