Evidence map›Paper›PMID 42189981›Full record

ReviewProceedings of the National Academy of Sciences of the United States of America2026

Genome evolution through polyploidy: Enhancing plant stress resilience in agriculture.

Patrick P Edger, Melanie J A Body, Sonia De Donno, Adrian E Platts, Jianrong Wang, Jiming Jiang

Abstract readReview
In one paragraph

Review in Proceedings of the National Academy of Sciences of the United States of America, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Genome-Wide Identification of NLP Family Genes in Cultivated Strawberry (International journal of molecular sciences · 2026
    Article
  2. Polyploidy and stress.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Patrick P EdgerDepartment of Horticulture, Michigan State University, East Lansing, MI 48824.ORCID 0000-0001-6836-3041
Melanie J A BodyDepartment of Horticulture, Michigan State University, East Lansing, MI 48824.
Sonia De DonnoHonors College, Michigan State University, East Lansing, MI 48824.ORCID 0009-0003-3960-3909
Adrian E PlattsDepartment of Horticulture, Michigan State University, East Lansing, MI 48824.ORCID 0000-0001-9238-9647
Jianrong WangDepartment of Computational Mathematics, Science, and Engineering, Michigan State University, East Lansing, MI 48824.
Jiming JiangDepartment of Horticulture, Michigan State University, East Lansing, MI 48824.

Funding

NSF (NSF) 2029959
6 · The paper itself

Abstract

Polyploidy, also known as whole genome duplication, is a major evolutionary force in plants, driving diversification and the generation of novel phenotypic variation, including superior abiotic and biotic stress tolerance. The enhanced stress resilience observed in certain polyploids is hypothesized to arise from dynamic epigenetic and genetic changes, including variations in gene content and cis-regulatory elements (CREs), that emerge following polyploidization. These changes directly impact various regulatory, signaling, and metabolic pathways associated with stress response and adaptation. Within polyploid populations, processes like gene duplications, fractionation, and homoeologous exchanges actively shape novel gene content variation, while, simultaneously, alterations in CREs (DNA sequences controlling gene expression) lead to diverse regulatory patterns. This dynamic interplay between changes in gene content and regulation further contributes to expanded phenotypic variation, including enhanced stress resilience. We discuss how advanced genomic and epigenomic techniques, such as pangenomics and single-cell assay for transposase-accessible chromatin with sequencing, are used to uncover these variations and outline new bioinformatic approaches to reveal the underlying genetics of stress resilience and adaptation. Finally, we summarize what remains poorly understood to guide future research, with the goal of unlocking the full potential for enhancing resilience in polyploid crops.

Indexed as

Genome, PlantPlantsPolyploidyAdaptation, PhysiologicalAgricultureEvolution, MolecularStress, Physiologicalagriculturegenome evolutionpolyploidystress resiliencewhole genome duplication

Identifiers

PMID42189981
PMCPMC13229190

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.