Evidence map›Paper›PMID 42186864›Full record

ArticleChembiochem : a European journal of chemical biology2026

Improvement of cDNA TRAP Display via Optimization of Puromycin Linker Design for Enhanced Discovery of Antibody-Like Proteins.

Haruto Kosugi, Hiroki Nakanishi, Gosuke Hayashi, Hiroshi Murakami

Abstract read
In one paragraph

Article in Chembiochem : a European journal of chemical biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0cells of the map it votes in
0citing papers in PubMed
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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Haruto KosugiDepartment of Biomolecular Engineering, Graduate School of Engineering, Nagoya University, Nagoya, Japan.
Hiroki NakanishiDepartment of Biomolecular Engineering, Graduate School of Engineering, Nagoya University, Nagoya, Japan.
Gosuke HayashiDepartment of Biomolecular Engineering, Graduate School of Engineering, Nagoya University, Nagoya, Japan.ORCID https://orcid.org/0000-0001-6853-2706
Hiroshi MurakamiDepartment of Biomolecular Engineering, Graduate School of Engineering, Nagoya University, Nagoya, Japan.ORCID https://orcid.org/0009-0006-7361-2018

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

cDNA TRAP display is a high-speed in vitro selection method for obtaining antibody-like proteins (ALPs) with desired functions, enabling selection even under harsh conditions. However, since its development, this method has not been applied to practical selection because of the low formation efficiency of the ALP-puromycin linker/mRNA complex (display efficiency), which is a key determinant of library diversity. In this study, we aimed to improve display efficiency by optimizing the puromycin linker design. Specifically, we evaluated modifications to the nucleotides at the 5' end and attachment position of the puromycin moiety at the 3' end, which resulted in a 1.8-fold increase in display efficiency. These findings provide insights into enhancing the performance of cDNA TRAP display and are expected to facilitate future ALP discovery.

Indexed as

AntibodiesDNA, ComplementaryPuromycinRNA, MessengerAntibodiesDNA, ComplementaryPuromycinRNA, MessengercDNA TRAP displaydirected evolutionin vitro selectionoligonucleotidesprotein engineering

Identifiers

PMID42186864
PMCPMC13206342

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.