Evidence map›Paper›PMID 42186049›Full record

ArticleClinical epigenetics2026

Epigenetic-Metabolic interplay in chronic kidney disease mortality: insights from grimage acceleration and transcriptomic profiling.

Xiangyun Dang, Zhongxin Jin, Yafeng Zhao, Yu Wang, Xiancheng Li, Xiaoyuan Liu, Pei Yan, Wei Xu, Yuhui Liu, Xiaoyong Yu and 1 more

Abstract read
In one paragraph

Article in Clinical epigenetics, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Xiangyun Dang *Department of Nephrology, Shaanxi Provincial Hospital of Traditional Chinese Medicine, No. 4, Xihuamen Street, Lianhu District, Xi'an, 710003, Shaanxi, China.
Zhongxin Jin *Department of Nephrology, Shaanxi Provincial Hospital of Traditional Chinese Medicine, No. 4, Xihuamen Street, Lianhu District, Xi'an, 710003, Shaanxi, China.
Yafeng ZhaoDepartment of Nephrology, Shaanxi Provincial Hospital of Traditional Chinese Medicine, No. 4, Xihuamen Street, Lianhu District, Xi'an, 710003, Shaanxi, China.
Yu WangDepartment of Nephrology, Shaanxi Provincial Hospital of Traditional Chinese Medicine, No. 4, Xihuamen Street, Lianhu District, Xi'an, 710003, Shaanxi, China.
Xiancheng LiDepartment of Nephrology, Shaanxi Provincial Hospital of Traditional Chinese Medicine, No. 4, Xihuamen Street, Lianhu District, Xi'an, 710003, Shaanxi, China.
Xiaoyuan LiuDepartment of Nephrology, Shaanxi Provincial Hospital of Traditional Chinese Medicine, No. 4, Xihuamen Street, Lianhu District, Xi'an, 710003, Shaanxi, China.
Pei YanDepartment of Nephrology, Shaanxi Provincial Hospital of Traditional Chinese Medicine, No. 4, Xihuamen Street, Lianhu District, Xi'an, 710003, Shaanxi, China.
Wei XuDepartment of Nephrology, Shaanxi Provincial Hospital of Traditional Chinese Medicine, No. 4, Xihuamen Street, Lianhu District, Xi'an, 710003, Shaanxi, China.
Yuhui LiuDepartment of Nephrology, Shaanxi Provincial Hospital of Traditional Chinese Medicine, No. 4, Xihuamen Street, Lianhu District, Xi'an, 710003, Shaanxi, China.
Xiaoyong YuDepartment of Nephrology, Shaanxi Provincial Hospital of Traditional Chinese Medicine, No. 4, Xihuamen Street, Lianhu District, Xi'an, 710003, Shaanxi, China. gub70725@126.com.
Nan ZhangDepartment of Nephrology, Shaanxi Provincial Hospital of Traditional Chinese Medicine, No. 4, Xihuamen Street, Lianhu District, Xi'an, 710003, Shaanxi, China. zn20030701@163.com.

Funding

National Natural Science Foundation of China No.82174366
6 · The paper itself

Abstract

backgroundChronic kidney disease (CKD) is associated with a substantially elevated risk of mortality. Although GrimAge acceleration (GAA) and metabolic syndrome (MetS) are both implicated in this risk, their combined impact and the underlying biological mechanisms remain poorly understood.

methodsThis study integrated data from National Health and Nutrition Examination Survey (NHANES; n = 2,529), Gene Expression Omnibus (GEO), and public aging-related genes. Participants with CKD were divided into four groups: low GAA without MetS (reference), high GAA without MetS (GAA), low GAA with MetS (MetS), and high GAA with MetS (GAA-MetS). Weighted Cox proportional hazards models were used to evaluate associations with all-cause mortality. Independent transcriptomic analyses of CKD (GSE66494), MetS (GSE98895) and aging-related genes datasets included differential expression analysis, weighted gene co-expression network analysis (WGCNA), and machine learning (LASSO and SVM-RFE) to identify hub genes. Immune cell infiltration was estimated using CIBERSORT.

resultsPatients with CKD in the GAA (HR = 2.331, 95% CI: 1.785-3.043, p < 0.001), MetS (HR = 1.314, 95% CI: 1.057-1.635, p = 0.014), and GAA-MetS (HR = 2.112, 95% CI: 1.525-2.927, p < 0.001) groups exhibited significantly higher mortality risks compared to the reference group. High GAA (HR = 2.083, 95% CI: 1.533-2.831, p < 0.001) independently predicted mortality in patients aged ≥ 72 years. Sex subgroup analyses revealed elevated risks for males in both the GAA (HR = 2.440, 95% CI: 1.471-4.048, p < 0.001) and GAA-MetS (HR = 2.320, 95% CI: 1.395-3.859, p = 0.001) groups, and for females in the GAA-MetS group (HR = 1.763, 95% CI: 1.054-2.950, p = 0.031). Transcriptomic analysis identified five hub genes (ZMPSTE24, RELB, STAT6, DKC1, E2F3) implicated in CKD pathogenesis, cellular senescence, and metabolic pathways, whose expression profiles were correlated with distinct alterations in immune cell infiltration within CKD tissues.

conclusionGAA is an independent predictor of all-cause mortality in CKD. The GAA-MetS identifies a particularly high-risk phenotype. Complementary transcriptomic analyses offer a testable hypothesis for the interplay between epigenetic and metabolic dysregulation of CKD pathogenesis.

Indexed as

Epigenesis, GeneticGene Expression ProfilingMetabolic SyndromeRenal Insufficiency, ChronicAgedFemaleHumansMaleMiddle AgedNutrition SurveysProportional Hazards ModelsTranscriptomeAll-cause mortalityCKDGrimAge accelerationMetabolic syndrome

Identifiers

PMID42186049
PMCPMC13202803

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.