Evidence map›Paper›PMID 42185761›Full record

ArticleBMC immunology2026

Immunoinformatic design of a multi-epitope vaccine candidate targeting multidrug-resistant Pseudomonas aeruginosa.

Maryam Babaei, Behzad Shahbazi, Parisa Sarkoohi, Abolfazl Azadi, Kimia Jafari Ranjbar, Khadijeh Ahmadi

Abstract read
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Article in BMC immunology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

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No citing paper in PubMed yet.

4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Maryam BabaeiStudent Research Committee, Faculty of Pharmacy, Hormozgan University of Medical Sciences, Bandar Abbas, Iran.
Behzad ShahbaziSchool of Pharmacy, Semnan University of Medical Sciences, Semnan, Iran.
Parisa SarkoohiDepartment of Pharmacology and Toxicology, Faculty of Pharmacy, Hormozgan University of Medical Sciences, Bandar Abbas, Iran.
Abolfazl AzadiPolymer Division, Department of Chemistry, Faculty of Science, University of Zanjan, Zanjan, 45371-38791, Iran.
Kimia Jafari RanjbarStudent Research Committee, Faculty of Pharmacy, Hormozgan University of Medical Sciences, Bandar Abbas, Iran.
Khadijeh AhmadiThe Persian Gulf Marine Biotechnology Research Center, The Persian Gulf Biomedical Sciences Research Institute, Bushehr University of Medical Sciences, Bushehr, Iran. khadijeh_6482@yahoo.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundPseudomonas aeruginosa, a World Health Organization (WHO) priority pathogen, causes severe multidrug-resistant (MDR) infections in immunocompromised and hospitalized patients, highlighting the critical need for effective vaccines. To this end, we designed a novel multi-epitope vaccine by integrating immunodominant domains from three key virulence proteins (PcrV, OprE, and CupC2) with the cholera toxin B subunit (CTB) as a mucosal adjuvant.

methodsImmunoinformatics was used to predict epitopes and construct a vaccine with EAAAKEAAAK linkers. In silico assessments included antigenicity, allergenicity, solubility, molecular docking with TLR2/TLR4, 150 ns MD simulations, PDBsum interaction analysis, and C-ImmSim immune profiling.

resultsBoth the adjuvanted and non-adjuvanted candidates were predicted to be non-allergenic, with antigenicity scores of 0.6557 and 0.7338, respectively, indicating strong immunogenic potential. Both constructs were also predicted to exhibit high solubility, with scores exceeding the threshold (0.927 and 0.729). Each vaccine candidate showed robust interactions with TLR2 and TLR4; however, the adjuvanted construct demonstrated superior binding affinity to both receptors. Molecular docking of the adjuvanted vaccine candidate followed by 150 ns molecular dynamics (MD) simulations confirmed stable and strong interactions with TLR2 and TLR4, as evidenced by RMSD values of 0.64 nm and 0.73 nm, and binding energies of ΔG = - 15.9 kcal/mol and - 12.7 kcal/mol, respectively further supporting their high immunogenic potential. Moreover, in silico immune simulation data predicted rapid induction of protective antibodies and cytokines and revealed that adjuvant-enhanced responses substantially improved the stability of the TLR2 complex.

conclusionThese computational results suggest that our multi-antigen vaccine candidate may have potential against Pseudomonas aeruginosa infections. Further validation through gene synthesis, murine immunogenicity studies (e.g., BALB/c models), and challenge experiments is required.

Indexed as

Drug Resistance, Multiple, BacterialEpitopesPseudomonas aeruginosaPseudomonas InfectionsPseudomonas VaccinesAnimalsBacterial ProteinsHumansImmunogenicity, VaccineImmunoinformaticsMiceMolecular Docking SimulationMolecular Dynamics SimulationProtein Subunit VaccinesToll-Like Receptor 2Toll-Like Receptor 4Bacterial ProteinsEpitopesProtein Subunit VaccinesPseudomonas VaccinesToll-Like Receptor 2Toll-Like Receptor 4DockingImmunoinformaticsMolecular dynamicsMulti-epitope vaccinePseudomonas aeruginosa

Identifiers

PMID42185761
PMCPMC13386574

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.