Evidence map›Paper›PMID 42185662›Full record

ArticleArchives of virology2026

Whole-genome sequencing of severe fever with thrombocytopenia syndrome virus using nanopore adaptive sampling.

Hye-Ryung Byun, Seong-Ryeong Ji, Joon-Seok Chae

Abstract read
PubMed Publisher
In one paragraph

Article in Archives of virology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Hye-Ryung ByunLaboratory of Veterinary Internal Medicine, BK21 FOUR Future Veterinary Medicine Leading Education and Research Center, Research Institute for Veterinary Science and College of Veterinary Medicine, Seoul National University, 1 Gwanak-ro, Gwanak-gu, Seoul, 08826, Republic of Korea.
Seong-Ryeong JiLaboratory of Veterinary Internal Medicine, BK21 FOUR Future Veterinary Medicine Leading Education and Research Center, Research Institute for Veterinary Science and College of Veterinary Medicine, Seoul National University, 1 Gwanak-ro, Gwanak-gu, Seoul, 08826, Republic of Korea.
Joon-Seok ChaeLaboratory of Veterinary Internal Medicine, BK21 FOUR Future Veterinary Medicine Leading Education and Research Center, Research Institute for Veterinary Science and College of Veterinary Medicine, Seoul National University, 1 Gwanak-ro, Gwanak-gu, Seoul, 08826, Republic of Korea. jschae@snu.ac.kr.

Funding

Seoul National University Office of Research Affairs research 550-20250009
6 · The paper itself

Abstract

Severe fever with thrombocytopenia syndrome virus (SFTSV) is a tick-borne zoonotic pathogen. We evaluated nanopore adaptive sampling (NAS) for whole-genome assembly using two wildlife-derived SFTSV isolates (Vero cell-cultured) sequenced alongside tick-derived samples. Using the PromethION platform, complete L, M, and S segments were successfully assembled in a single run. NAS supported the reconstruction of previously characterized isolate, including an extended S segment, and enabled the characterization of a genotype B-2 isolate. These results suggest that NAS is an effective tool for genomic surveillance of SFTSV under complex sequencing conditions.

Indexed as

Genome, ViralPhlebovirusSevere Fever with Thrombocytopenia SyndromeWhole Genome SequencingAnimalsChlorocebus aethiopsGenotypeNanoporesPhylogenyTicksVero Cells

Identifiers

PMID42185662

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.