Evidence map›Paper›PMID 42173974›Full record

ArticleScientific data2026

A comprehensive transcriptomic dataset of Sorghum bicolor seedlings under abiotic stress conditions.

Won Cheol Yim, Yu Kyong Hu, Jonathan S Lomas, Sang Hun Kim, Dong Yeol Song, Nguyen Viet Phong, Seo Young Yang, Sung Don Lim

Abstract readDataset
In one paragraph

Article in Scientific data, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Won Cheol Yim *Department of Biochemistry and Molecular Biology, University of Nevada, Reno, NV, 89557-0330, USA.
Yu Kyong Hu *Molecular Plant Physiology Laboratory, Department of Smart-fam Life Sciences, Sangji University, Wonju, 26339, Republic of Korea.
Jonathan S LomasMolecular Plant Physiology Laboratory, Department of Smart-fam Life Sciences, Sangji University, Wonju, 26339, Republic of Korea.
Sang Hun KimMolecular Plant Physiology Laboratory, Department of Smart-fam Life Sciences, Sangji University, Wonju, 26339, Republic of Korea.
Dong Yeol SongMolecular Plant Physiology Laboratory, Department of Smart-fam Life Sciences, Sangji University, Wonju, 26339, Republic of Korea.
Nguyen Viet PhongDepartment of Biology Education, Teachers College and Institute for Phylogenomics and Evolution, Kyungpook National University, Daegu, 41566, Republic of Korea.ORCID http://orcid.org/0000-0003-1715-4455
Seo Young YangDepartment of Biology Education, Teachers College and Institute for Phylogenomics and Evolution, Kyungpook National University, Daegu, 41566, Republic of Korea. syy@knu.ac.kr.ORCID http://orcid.org/0000-0002-5248-1374
Sung Don LimMolecular Plant Physiology Laboratory, Department of Smart-fam Life Sciences, Sangji University, Wonju, 26339, Republic of Korea. sdlim@sangji.ac.kr.ORCID http://orcid.org/0000-0002-5796-1019

Funding

Ministry of Agriculture, Food and Rural Affairs (MAFRA) RS-2024-00400922
6 · The paper itself

Abstract

Sorghum [Sorghum bicolor (L.) Moench], a C₄ cereal crop, is the fifth most widely cultivated cereal globally and is cultivated in over 100 countries for food, fodder, and biofuel production. Its exceptional resilience to abiotic stresses such as salinity, drought, heat, and cold makes it a valuable model for crop adaptability research under climate change. Here, we present a comprehensive, time-resolved RNA-seq dataset from sorghum seedlings (cultivar Hwanggeumchal) subjected to salt, PEG-induced drought, heat, cold, and abscisic acid (ABA) treatments. Leaf tissue was sampled at 6, 12, and 24 hours post-treatment across three biological replicates, yielding 54 strand-specific libraries sequenced on the Illumina NovaSeq. 6000 platform. The dataset includes raw sequencing reads deposited in the NCBI SRA, together with processed data comprising differential gene expression profiles, Gene Ontology enrichment analyses, and a gene co-expression network, all hosted on Figshare. This resource is intended to facilitate comparative transcriptomic studies and functional gene discovery related to abiotic stress responses in sorghum and other cereal crops.

Indexed as

SeedlingsSorghumTranscriptomeDroughtsStress, Physiological

Identifiers

PMID42173974
PMCPMC13276052

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.