Evidence map›Paper›PMID 42172582›Full record

ArticleBioinformatics (Oxford, England)2026

eFEL: electrophysiology feature extraction library.

Darshan Mandge, Anıl Tuncel, Aurélien Jaquier, Ilkan Kilic, Tanguy Damart, Henry Markram, Werner Van Geit, Rajnish Ranjan

Abstract read
In one paragraph

Article in Bioinformatics (Oxford, England), 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Darshan MandgeBlue Brain Project, École Polytechnique Fédérale de Lausanne (EPFL), Campus Biotech, Geneva 1202, Switzerland.ORCID 0000-0002-7104-4604
Anıl TuncelBlue Brain Project, École Polytechnique Fédérale de Lausanne (EPFL), Campus Biotech, Geneva 1202, Switzerland.
Aurélien JaquierBlue Brain Project, École Polytechnique Fédérale de Lausanne (EPFL), Campus Biotech, Geneva 1202, Switzerland.
Ilkan KilicBlue Brain Project, École Polytechnique Fédérale de Lausanne (EPFL), Campus Biotech, Geneva 1202, Switzerland.
Tanguy DamartBlue Brain Project, École Polytechnique Fédérale de Lausanne (EPFL), Campus Biotech, Geneva 1202, Switzerland.
Henry MarkramBlue Brain Project, École Polytechnique Fédérale de Lausanne (EPFL), Campus Biotech, Geneva 1202, Switzerland.
Werner Van GeitBlue Brain Project, École Polytechnique Fédérale de Lausanne (EPFL), Campus Biotech, Geneva 1202, Switzerland.
Rajnish RanjanBlue Brain Project, École Polytechnique Fédérale de Lausanne (EPFL), Campus Biotech, Geneva 1202, Switzerland.ORCID 0000-0003-0555-833X

Funding

Swiss government's ETH Board of the Swiss Federal Institutes of Technology
6 · The paper itself

Abstract

motivationElectrophysiological recordings are essential in experimental and computational neuroscience, providing insights into neuronal excitability and network behaviour. Extracting features such as action potential thresholds, widths, and firing patterns is conceptually straightforward, but in practice it is complicated by heterogeneous datasets and software environments, which hinder reproducibility and interoperability. A standardized, efficient, and portable framework is needed to ensure consistent analysis across platforms and alignment with community data standards.

resultsWe present the Electrophysiology Feature Extraction Library (eFEL), a cross-platform, open-source library that implements standardized definitions for over 90 electrophysiological features. eFEL combines a high-performance C++ core with a Python interface, supporting customizable feature dependencies, caching, and parallelization. It integrates with community standards such as Neurodata Without Borders and works seamlessly with common electrophysiology formats and simulation environments. Since its initial release in 2015, eFEL has been used in published studies spanning single-cell analysis, model optimization, multimodal fitting, and circuit simulations. eFEL provides a FAIR-compliant, versatile resource for reproducible electrophysiological data analysis. AVAILABILITY AND IMPLEMENTATION: The eFEL library is publicly available at https://github.com/openbraininstitute/eFEL and the associated study data and scripts have been deposited in Zenodo at https://zenodo.org/records/17241835.

Indexed as

Computational BiologyElectrophysiological PhenomenaElectrophysiologySoftwareAction PotentialsAlgorithms

Identifiers

PMID42172582
PMCPMC13257855

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.