Evidence map›Paper›PMID 42170675›Full record

ArticleFrontiers in cellular and infection microbiology2026

Total laboratory automation-based monitoring processes: setup and validation of an integrated internal quality control panel.

Adrien Fischer, Abdessalam Cherkaoui, Didier Schorderet, Julie Wagner, Jacques Schrenzel

Abstract read
In one paragraph

Article in Frontiers in cellular and infection microbiology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Adrien FischerBacteriology Laboratory, Department of Diagnostics, Geneva University Hospitals, Geneva, Switzerland.
Abdessalam CherkaouiBacteriology Laboratory, Department of Diagnostics, Geneva University Hospitals, Geneva, Switzerland.
Didier SchorderetBacteriology Laboratory, Department of Diagnostics, Geneva University Hospitals, Geneva, Switzerland.
Julie WagnerBacteriology Laboratory, Department of Diagnostics, Geneva University Hospitals, Geneva, Switzerland.
Jacques SchrenzelBacteriology Laboratory, Department of Diagnostics, Geneva University Hospitals, Geneva, Switzerland.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Total laboratory automation (TLA) is now widely implemented in diagnostic microbiology laboratories. However, a coherent and standardized quality surveillance procedure for all the automated culture-based processes is currently lacking. Objectives: We set up and implemented an internal quality control (IQC) panel to assess the automated culture-based processes and workflows. Methods: A subset of reference strains was applied to monitor liquid and solid culture media used in all culture-based processes on the TLA. This integrated IQC panel monitors staining, automated plate streaking, incubation and digital imaging, artificial intelligence (AI)-assisted plate reading, identification by MALDI-ToF-MS, fully automated antimicrobial disc diffusion susceptibility testing, minimum inhibitory concentration (MIC) determination by broth microdilution and E-test strips, and finally, detection of the defined antimicrobial resistance genes by molecular assays. Results: During 6 months of implementation of this new routine IQC approach, no errors were detected regarding all the culture-based and antimicrobial susceptibility testing (AST) processes, including antimicrobial resistance gene detection, with the exception of one major error related to a MIC misreading for imipenem. Conclusions: This IQC approach ensures the traceability and control of the analytical phase of an automated laboratory. Annual costs for these integrated IQC panels amounted to CHF 17,886.-, of which 53% were related to personal time costs. The latter could be improved by further software development for sample prescription, data collection, and reporting.

Indexed as

Automation, LaboratoryBacteriological TechniquesQuality ControlAnti-Bacterial AgentsBacteriaCulture MediaHumansMicrobial Sensitivity TestsAnti-Bacterial AgentsCulture Mediadiagnostic laboratoryinternal quality controlmicrobiologyquality costsreference strainstotal laboratory automation (TLA)

Identifiers

PMID42170675
PMCPMC13188209

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.