Evidence map›Paper›PMID 42168261›Full record

ArticleScientific reports2026

A deterministic method for quantifying spindle-shaped cells in noisy bright-field microscopy.

Martin Radvanský, Markéta Vašinková, Miloš Kudělka, Eva Kriegová, Petr Gajdoš

Abstract read
In one paragraph

Article in Scientific reports, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Martin RadvanskýDepartment of Computer Science, FEECS, VSB - Technical University of Ostrava, 17. listopadu 2172/15, 70800, Ostrava, Czech Republic.
Markéta VašinkováDepartment of Computer Science, FEECS, VSB - Technical University of Ostrava, 17. listopadu 2172/15, 70800, Ostrava, Czech Republic. marketa.vasinkova@vsb.cz.
Miloš KudělkaDepartment of Computer Science, FEECS, VSB - Technical University of Ostrava, 17. listopadu 2172/15, 70800, Ostrava, Czech Republic.
Eva KriegováDepartment of Immunology, Faculty of Medicine and Dentistry, Palacky University & University Hospital, Hněvotínská 976/3, 775 15, Olomouc, Czech Republic.
Petr GajdošDepartment of Computer Science, FEECS, VSB - Technical University of Ostrava, 17. listopadu 2172/15, 70800, Ostrava, Czech Republic.

Funding

Center for Artificial Intelligence and Quantum Computing in System Brain Research 101136607-02MH CZ-DRO FNOl, 00098892Ministry of Health of the Czech Republic NW24-10-00395Research Platform for Digital Transformation and Society 5.0 CZ.02.01.01/00/23_021/0012599the Internal Grant Agency of VSB-TUO SP2026/008
6 · The paper itself

Abstract

Accurate quantification of spindle-shaped cells in bright-field microscopy remains challenging due to low contrast, noise, and highly variable cell morphology. Conventional approaches often rely on fluorescent staining or deep learning models, which may introduce phototoxic effects, require extensive training data, or offer limited interpretability. Here, we present a deterministic image analysis method for quantifying spindle-shaped cells directly from noisy bright-field microscopy images without the need for fluorescent labeling or supervised training. The proposed workflow combines contrast enhancement, adaptive thresholding, contour filtering, and shape-guided refinement to detect elongated cell bodies under challenging imaging conditions. The method is designed to be robust to irregular cell morphology and heterogeneous background commonly encountered in bright-field time-lapse microscopy. Quantitative evaluation demonstrates reliable cell counting and consistent performance across varying noise levels and imaging conditions. The approach achieves competitive accuracy while maintaining interpretability and low computational complexity, enabling straightforward integration into existing biomedical imaging workflows. By preserving cell morphology and avoiding fluorescent staining and complex model training, the method provides a practical solution for large-scale analysis of spindle-shaped cell populations in bright-field microscopy experiments.

Indexed as

Cell ShapeImage Processing, Computer-AssistedMicroscopyAlgorithmsAnimalsHumansBright-field microscopyCell countingContour detectionFibroblast-like cellsGaussian-based modelSpindle-shaped cells

Identifiers

PMID42168261
PMCPMC13402725

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.