Evidence map›Paper›PMID 42168214›Full record

ArticleScientific data2026

First telomere-to-telomere gapless genome assembly of the blackleg fungus Plenodomus lingam.

Tao Luo, Mingde Wu, Jing Zhang, Guoqing Li, Long Yang

Abstract readDataset
PubMed Full text at PMC Publisher
In one paragraph

Article in Scientific data, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Tao LuoThe State Key Laboratory of Agricultural Microbiology and Hubei Key Laboratory of Plant Pathology, Huazhong Agricultural University, Wuhan, 430070, China.
Mingde WuThe State Key Laboratory of Agricultural Microbiology and Hubei Key Laboratory of Plant Pathology, Huazhong Agricultural University, Wuhan, 430070, China.ORCID http://orcid.org/0000-0001-8014-5688
Jing ZhangThe State Key Laboratory of Agricultural Microbiology and Hubei Key Laboratory of Plant Pathology, Huazhong Agricultural University, Wuhan, 430070, China.
Guoqing LiThe State Key Laboratory of Agricultural Microbiology and Hubei Key Laboratory of Plant Pathology, Huazhong Agricultural University, Wuhan, 430070, China.
Long YangThe State Key Laboratory of Agricultural Microbiology and Hubei Key Laboratory of Plant Pathology, Huazhong Agricultural University, Wuhan, 430070, China. yanglong@mail.hzau.edu.cn.ORCID http://orcid.org/0000-0002-6722-0900

Funding

Earmarked Fund for China Agriculture Research System CARS-12
6 · The paper itself

Abstract

Blackleg disease, caused by the ascomycete fungus Plenodomus lingam (syn.: Leptosphaeria maculans), is the most devastating disease of oilseed rape worldwide. As a model organism for studying plant-fungus interactions, P. lingam has been extensively studied, yet telomere-to-telomere (T2T) genome assemblies have been lacking. Here, we report a high-quality T2T gapless genome assembly of P. lingam 'brassicae' strain 479-2, generated using MGI short reads, PacBio/Nanopore long reads, and Hi-C data. The assembly comprises 19 nuclear chromosomes totaling 40.74 Mb, each capped by telomeric repeats (CCCTAA/TTAGGG), and a complete circular mitochondrial genome of 169,227 bp. Key quality metrics include: 46.08% GC content, 30.09% repeat content, 98.5% complete BUSCOs (fungi_odb10), a consensus quality score of 45.86, and a low error rate of 2.59 × 10

Indexed as

AscomycotaGenome, FungalTelomereGenome, MitochondrialLeptosphaeriaPlant Diseases

Identifiers

PMID42168214
PMCPMC13462568

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.