Evidence map›Paper›PMID 42166332›Full record

ArticleSTAR protocols2026

Protocol for cell cycle-resolved high-content imaging of transcription condensate dynamics in human cells.

Michaela R Russo, Melissa J McEvoy, Joshua C Saldivar

Abstract read
In one paragraph

Article in STAR protocols, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Michaela R RussoProgram in Biomedical Sciences, School of Medicine, Oregon Health and Science University, Portland, OR 97239, USA. Electronic address: russomi@ohsu.edu.
Melissa J McEvoyProgram in Biomedical Sciences, School of Medicine, Oregon Health and Science University, Portland, OR 97239, USA; Cancer Early Detection Advanced Research Center, Knight Cancer Institute, Oregon Health and Science University, Portland, OR 97201, USA.
Joshua C SaldivarCancer Early Detection Advanced Research Center, Knight Cancer Institute, Oregon Health and Science University, Portland, OR 97201, USA; Division of Oncological Sciences, Knight Cancer Institute, Oregon Health and Science University, Portland, OR 97201, USA. Electronic address: saldivaj@ohsu.edu.

Funding

Nuclear dynamics maintaining chromatin integrity during DNA replicationR35GM147710 · NIGMS · OREGON HEALTH & SCIENCE UNIVERSITY · PI Joshua Saldivar · 2022 to 2026
$1.9M
NIGMS NIH HHS R35 GM147710
6 · The paper itself

Abstract

Transcription condensates are dynamic, phase-separated compartments that control gene activation. Here, we present a protocol for studying transcription condensate dynamics in human cells. We describe steps for staining nascent DNA and endogenous condensate markers. We then detail procedures for automated confocal microscopy and analysis. Our high-throughput approach infers condensate dynamics across large timescales, allowing quantification of condensate changes across cell-cycle transitions and phases without synchronization. For complete details on the use and execution of this protocol, please refer to Marmolejo et al.

Indexed as

Cell CycleTranscription, GeneticDNAHumansMicroscopy, ConfocalDNACell BiologyHigh Throughput ScreeningMicroscopyMolecular Biology

Identifiers

PMID42166332
PMCPMC13199755

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.