Evidence map›Paper›PMID 42163894›Full record

ArticleRegenerative engineering and translational medicine2025

Enzymatic Methods for Assembling and Modifying Hydrogel Biomaterials.

Irina Kopyeva, Cole A DeForest

Abstract read
In one paragraph

Article in Regenerative engineering and translational medicine, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Irina KopyevaDepartment of Bioengineering, University of Washington, Seattle, WA 98105, USA.ORCID 0000-0003-3740-6971
Cole A DeForestDepartment of Bioengineering, University of Washington, Seattle, WA 98105, USA.ORCID 0000-0003-0337-3577

Funding

Interdisciplinary Tranining in Cancer ResearchT32CA080416 · NCI · UNIVERSITY OF WASHINGTON · PI STODDARD, BARRY L. · 1998 to 2023
$9.7M
Mimicking, Exploiting, and Understanding Biology's Heterogeneity in 4DR35GM138036 · NIGMS · UNIVERSITY OF WASHINGTON · PI Cole A DeForest · 2020 to 2026
$2.3M
A 4D-tunable hydrogel for the study of the impact of the tumor microenvironment on the development of colorectal cancerR01CA289291 · NCI · UNIVERSITY OF WASHINGTON · PI Nancy L. Allbritton, Cole A DeForest · 2024 to 2026
$1.6M
On-Demand Modulation of Extracellular Matrix Mechanics for Studying RhoA Activation in Primary and Metastatic Colorectal CancerR21CA283686 · NCI · UNIVERSITY OF WASHINGTON · PI DEFOREST, COLE A, GRADY, WILLIAM MALLORY · 2024 to 2024
$428k
NCI NIH HHS R01 CA289291NCI NIH HHS R21 CA283686NCI NIH HHS T32 CA080416NIGMS NIH HHS R35 GM138036
6 · The paper itself

Abstract

Purpose: Enzymatic reactions offer many advantages for hydrogel synthesis and modification, due to their gentle reaction conditions, biocompatibility, and diversity of substrates. Methods: In this review, we examine the current body of literature through databases such as Google Scholar, PubMed, and Web of Science. Results: Various enzyme classes have been utilized for hydrogel assembly and disassembly, including transglutaminases, oxidoreductases, transpeptidases, and proteinases. The enzymatic substrates can be readily included in peptide precursors and/or appended onto synthetic polymers. We discuss the benefits and limitations of each system, with a focus on ease of use/synthesis, accessibility, and financial considerations. Conclusion: Enzymes are frequently utilized to modify both natural and synthetic biomaterials. For developing more advanced, stimuli-responsive platforms, "biologically invisible" enzymes such as sortases should be leveraged to not interfere with native processes and/or the mammalian proteome. Lay Summary: Enzymes, proteins that act as biological catalysts, are an important tool for making and breaking down hydrogels, or water-swollen polymeric networks, for various biomedical applications. In particular, these techniques have seen great usage for modeling the tissue environment for lab-based assays.

Indexed as

EnzymesHydrogelStimuli-responsive

Identifiers

PMID42163894
PMCPMC13186249

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.