Evidence map›Paper›PMID 42163260›Full record

ArticleMicrobial cell factories2026

Conversion of CO

Nathalie Sofie Becker, Franziska Hufnagel, Paul Bolay, Kevin Otec, Tim Orthwein, Andreas Kulik, Phillipp Fink, Claudius Lenz, Pia Lindberg, Karl Forchhammer and 1 more

Abstract read
In one paragraph

Article in Microbial cell factories, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Nathalie Sofie BeckerOrganismic Interactions Department, Interfaculty Institute for Microbiology and Infection Medicine, Tübingen University, Auf der Morgenstelle 28, 72076, Tübingen, Germany.ORCID http://orcid.org/0000-0002-6893-1181
Franziska HufnagelDepartment of Solar Materials Biotechnology, Helmholtz Centre for Environmental Research, Permoserstrasse 15, 04318, Leipzig, Germany.
Paul BolayDepartment of Chemistry - Ångström Laboratory, Uppsala University, Lägerhyddsvägen 1, Uppsala, 752 37, Sweden.
Kevin OtecDepartment of Solar Materials Biotechnology, Helmholtz Centre for Environmental Research, Permoserstrasse 15, 04318, Leipzig, Germany.
Tim OrthweinOrganismic Interactions Department, Interfaculty Institute for Microbiology and Infection Medicine, Tübingen University, Auf der Morgenstelle 28, 72076, Tübingen, Germany.
Andreas KulikDepartment of Microbial Bioactive Compounds, Interfaculty Institute of Microbiology and Infection Medicine, Tübingen University, Auf der Morgenstelle 28, 72076, Tübingen, Germany.
Phillipp FinkOrganismic Interactions Department, Interfaculty Institute for Microbiology and Infection Medicine, Tübingen University, Auf der Morgenstelle 28, 72076, Tübingen, Germany.
Claudius LenzDepartment of Microbial Biotechnology, Helmholtz Centre for Environmental Research, Permoserstrasse 15, 04318, Leipzig, Germany.
Pia LindbergDepartment of Chemistry - Ångström Laboratory, Uppsala University, Lägerhyddsvägen 1, Uppsala, 752 37, Sweden.
Karl ForchhammerOrganismic Interactions Department, Interfaculty Institute for Microbiology and Infection Medicine, Tübingen University, Auf der Morgenstelle 28, 72076, Tübingen, Germany.
Stephan KlähnDepartment of Solar Materials Biotechnology, Helmholtz Centre for Environmental Research, Permoserstrasse 15, 04318, Leipzig, Germany. stephan.klaehn@ufz.de.ORCID http://orcid.org/0000-0002-2933-486X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundIn response to rising CO

resultsIn this study, we exploit the PirC-PGAM interaction as a novel target for regulatory metabolic engineering in the model cyanobacterium Synechocystis sp. PCC 6803 (Synechocystis). Chassis strains with engineered control of PGAM, defined as PGAM-ON or PGAM-OFF states, were generated using two complementary approaches: tuning pgam gene expression and modulating PirC abundance to regulate PGAM activity. The effectiveness of this regulatory engineering strategy was demonstrated by redirecting carbon flux toward two representative, naturally occurring products: sucrose, produced via gluconeogenesis fueled by the Calvin-Benson-Bassham (CBB) cycle, and succinate, an intermediate of the tricarboxylic acid (TCA) cycle. Narrowing the PGAM valve resulted in a threefold increase in sucrose accumulation. In contrast, opening the PGAM valve by relieving PGAM inhibition through pirC deletion or separate pgam overexpression resulted in up to an 18-fold increase in succinate excretion. Furthermore, similar genetic configurations were applied to enhance production of a heterologous compound, isoprene, derived from pyruvate.

conclusionsThis study establishes the PGAM valve as a tunable control point for the rational re-direction of carbon flux in Synechocystis and highlights small regulatory proteins as powerful targets for metabolic engineering. Together, these findings provide proof of concept for an advanced level of molecular engineering in cyanobacteria and to fully harness their biocatalytic potential in future photosynthesis-driven biotechnological applications.

Indexed as

Bacterial ProteinsCarbon DioxideMetabolic EngineeringPhosphoglycerate MutaseSynechocystisCarbonCarbon CyclePhotosynthesisBacterial ProteinsCarbonCarbon DioxidePhosphoglycerate MutaseCarbon fluxCyanobacteriaMetabolic engineeringMetabolic regulationMolecular tools

Identifiers

PMID42163260
PMCPMC13192157

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.