Evidence map›Paper›PMID 42162348›Full record

ArticleBJC reports2026

Beckwith-Wiedemann syndrome multiomic analysis of hepatoblastoma uncovers unique tumour heterogeneity and cellular landscapes, including transition cells leading to tumour formation.

Snehal Nirgude, Elisia D Tichy, Yuanchao Zhang, Khanh B Trang, Rose D Pradieu, Michael Xie, Kathrin M Bernt, Suzanne P MacFarland, Jennifer M Kalish

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Article in BJC reports, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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4 · The record

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5 · Who and what money

Authors and funding

9 authors.

Snehal Nirgude *Division of Genetic and Genomic Medicine, Children's Hospital of Philadelphia, Philadelphia, PA, USA.
Elisia D Tichy *Division of Genetic and Genomic Medicine, Children's Hospital of Philadelphia, Philadelphia, PA, USA.
Yuanchao ZhangDepartment of Biomedical and Health Informatics, Children's Hospital of Philadelphia, Philadelphia, PA, USA.
Khanh B TrangCenter for Spatial and Functional Genomics, Children's Hospital of Philadelphia, Philadelphia, PA, USA.
Rose D PradieuDivision of Genetic and Genomic Medicine, Children's Hospital of Philadelphia, Philadelphia, PA, USA.
Michael XieDepartment of Biomedical and Health Informatics, Children's Hospital of Philadelphia, Philadelphia, PA, USA.
Kathrin M BerntDepartment of Pediatrics, Perelman School of Medicine at the University of Pennsylvania, Philadelphia, PA, USA.
Suzanne P MacFarlandDepartment of Pediatrics, Perelman School of Medicine at the University of Pennsylvania, Philadelphia, PA, USA.
Jennifer M KalishDivision of Genetic and Genomic Medicine, Children's Hospital of Philadelphia, Philadelphia, PA, USA. kalishj@chop.edu.

Funding

Damon Runyon Clinical Investigator Award 105-19NIH HHS K08-CA193915
6 · The paper itself

Abstract

backgroundBeckwith-Wiedemann syndrome (BWS) is an overgrowth and cancer predisposition syndrome caused by epigenetic alterations on chromosome 11p15 that predisposes children to multiple cancer types, including hepatoblastoma. Hepatoblastoma is heterogenous in nature, and the 11p15 changes that cause BWS can also be found as a somatic alteration in nonBWS hepatoblastomas, further adding complexity to this disease.

methodsTo understand the impact of the predisposition molecular cues in BWS hepatoblastoma, we interrogated BWS and nonBWS hepatoblastomas, as well as adjacent normal liver, using a multiomic approach [single nuclei RNA-sequencing (snRNA-seq) + single nuclei assay for transposable-accessible chromatin sequencing (snATAC-seq)].

resultsOur approach identified an enrichment of the WNT signaling pathway in BWS hepatoblastoma. Despite similar histology, we found greater tumour heterogeneity and embryonic transcriptional signatures in BWS hepatoblastoma. Furthermore, using pseudotime analysis, we identified a population of transition cells in BWS, with unique molecular profiles, which likely promote the precancer to cancer neoplastic transition in BWS.

conclusionsThis study highlights key signaling pathways, particularly WNT, and identifies a unique population of intermediate/transition cells that may drive neoplastic transformation in BWS hepatoblastoma. These findings provide new insights into the molecular events leading to cancer in BWS and suggest potential targets for early intervention and prevention strategies.

Identifiers

PMID42162348
PMCPMC13190687

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.