Evidence map›Paper›PMID 42162240›Full record

ArticleThe EMBO journal2026

Autoinhibitory feedback preserves intestinal stem cell maintenance and fate commitment.

Siamak Redhai, Nick Hirschmüller, Tianyu Wang, Tyler Jackson, Stefan Peidli, Erica Valentini, Shivohum Bahuguna, Svenja Leible, Sarina Möller, Christina Ko and 8 more

Abstract read
In one paragraph

Article in The EMBO journal, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Siamak Redhai *German Cancer Research Center (DKFZ), Division Signaling and Functional Genomics, Heidelberg, Germany. siamak.redhai@dkfz.de.ORCID http://orcid.org/0000-0002-1202-9455
Nick Hirschmüller *European Molecular Biology Laboratory (EMBL), Meyerhofstraße 1, Heidelberg, Germany.ORCID http://orcid.org/0000-0003-2820-6433
Tianyu WangGerman Cancer Research Center (DKFZ), Division Signaling and Functional Genomics, Heidelberg, Germany.ORCID http://orcid.org/0000-0001-5114-1784
Tyler JacksonHuffington Center on Aging & Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, USA.ORCID http://orcid.org/0000-0003-2988-4340
Stefan PeidliEuropean Molecular Biology Laboratory (EMBL), Meyerhofstraße 1, Heidelberg, Germany.ORCID http://orcid.org/0000-0002-4257-8690
Erica ValentiniGerman Cancer Research Center (DKFZ), Division Signaling and Functional Genomics, Heidelberg, Germany.ORCID http://orcid.org/0000-0002-5355-5670
Shivohum BahugunaGerman Cancer Research Center (DKFZ), Division Signaling and Functional Genomics, Heidelberg, Germany.
Svenja LeibleGerman Cancer Research Center (DKFZ), Division Signaling and Functional Genomics, Heidelberg, Germany.
Sarina MöllerGerman Cancer Research Center (DKFZ), Division Signaling and Functional Genomics, Heidelberg, Germany.
Christina KoBioSciences Department, Rice University, Houston, TX, USA.ORCID http://orcid.org/0009-0001-8530-4075
Michaela HolzemGerman Cancer Research Center (DKFZ), Division Signaling and Functional Genomics, Heidelberg, Germany.
Sviatoslav KharukEuropean Molecular Biology Laboratory (EMBL), Meyerhofstraße 1, Heidelberg, Germany.ORCID http://orcid.org/0009-0006-9901-6185
Lea BräckowGerman Cancer Research Center (DKFZ), Division Signaling and Functional Genomics, Heidelberg, Germany.
Fillip PortGerman Cancer Research Center (DKFZ), Division Signaling and Functional Genomics, Heidelberg, Germany.
David IbbersonCellnetworks Core Technology Platform (CCTP), Deep Sequencing Labor, Heidelberg, Germany.
Hongjie LeHuffington Center on Aging & Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, USA.
Wolfgang HuberEuropean Molecular Biology Laboratory (EMBL), Meyerhofstraße 1, Heidelberg, Germany. wolfgang.huber@embl.org.ORCID http://orcid.org/0000-0002-0474-2218
Michael BoutrosGerman Cancer Research Center (DKFZ), Division Signaling and Functional Genomics, Heidelberg, Germany. m.boutros@dkfz.de.ORCID http://orcid.org/0000-0002-9458-817X

Funding

ERC DECODEEU Marie Skłodowska-Curie Individual Fellowship 894568NIH/NIDDK 1F31DK141194-01A1NIH/NIGMS T32-GM136554
6 · The paper itself

Abstract

Intestinal stem cells (ISCs) continuously renew the gut epithelium by producing specialised cell types, yet the mechanisms that couple ISC renewal with lineage commitment remain poorly characterised. Here, we identify a self-limiting transcriptional program, mediated by the zinc-finger transcription factor Chronophage (Cph), that promotes both ISC maintenance and differentiation into enteroendocrine (EE) cells in the Drosophila midgut. Cph expression is transiently induced by the proneural factor scute at the onset of ISC-to-EE specification. Genetic and single-cell transcriptomic approaches revealed that Cph is required to reprogramme ISCs and sustain normal lifespan. Cph binds to genes involved in proliferation and differentiation, and directly represses its own expression. This autoinhibitory feedback safeguards ISCs from accumulating autophagosomes and undergoing cell death, thus preserving ISC function. Our findings uncover a key regulatory mechanism that balances stem cell maintenance and differentiation, highlighting principles relevant to regenerating tissues.

Indexed as

Cell DifferentiationDrosophila ProteinsEnteroendocrine CellsIntestinesStem CellsTranscription FactorsAnimalsCell ProliferationDrosophilaDrosophila melanogasterFeedback, PhysiologicalIntestinal MucosaDrosophila ProteinsTranscription Factors

Identifiers

PMID42162240
PMCPMC13324515

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.