Evidence map›Paper›PMID 42162225›Full record

ArticleCommunications biology2026

Circulating metabolites associated with protection against Mycobacterium tuberculosis infection and inhibition of mycobacterial growth.

Todia P Setiabudiawan, Lika Apriani, Julian Avila-Pacheco, Edwin Ardiansyah, Vinod Kumar, Bachti Alisjahbana, Ayesha J Verrall, Andrew R DiNardo, Agnes R Indrati, Vera P Mourits and 11 more

Abstract read
In one paragraph

Article in Communications biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors.

Todia P SetiabudiawanDepartment of Internal Medicine and Radboud Community for Infectious Diseases (RCI), Radboud University Medical Center, Nijmegen, The Netherlands.ORCID http://orcid.org/0000-0002-3252-1201
Lika AprianiResearch Center for Care and Control of Infectious Diseases, Universitas Padjadjaran, Bandung, Indonesia.
Julian Avila-PachecoThe Broad Institute of Harvard and MIT, Cambridge, MA, USA.ORCID http://orcid.org/0000-0001-9388-3946
Edwin ArdiansyahDepartment of Internal Medicine and Radboud Community for Infectious Diseases (RCI), Radboud University Medical Center, Nijmegen, The Netherlands.
Vinod KumarDepartment of Internal Medicine and Radboud Community for Infectious Diseases (RCI), Radboud University Medical Center, Nijmegen, The Netherlands.
Bachti AlisjahbanaResearch Center for Care and Control of Infectious Diseases, Universitas Padjadjaran, Bandung, Indonesia.
Ayesha J VerrallDepartment of Pathology and Molecular Medicine, University of Otago, Wellington, New Zealand.
Andrew R DiNardoGlobal TB Program, Baylor College of Medicine/Texas Childrens Hospital, Houston, TX, USA.ORCID http://orcid.org/0000-0001-5990-6470
Agnes R IndratiDepartment of Clinical Pathology, Faculty of Medicine, Universitas Padjadjaran, Bandung, Indonesia.ORCID http://orcid.org/0000-0003-3923-9767
Vera P MouritsDepartment of Internal Medicine and Radboud Community for Infectious Diseases (RCI), Radboud University Medical Center, Nijmegen, The Netherlands.
L Charlotte J de BreeDepartment of Internal Medicine and Radboud Community for Infectious Diseases (RCI), Radboud University Medical Center, Nijmegen, The Netherlands.
Simone J C F M MoorlagDepartment of Internal Medicine and Radboud Community for Infectious Diseases (RCI), Radboud University Medical Center, Nijmegen, The Netherlands.
Clary B ClishThe Broad Institute of Harvard and MIT, Cambridge, MA, USA.ORCID http://orcid.org/0000-0001-8259-9245
Leo A B JoostenDepartment of Internal Medicine and Radboud Community for Infectious Diseases (RCI), Radboud University Medical Center, Nijmegen, The Netherlands.ORCID http://orcid.org/0000-0001-6166-9830
Arjan van LaarhovenDepartment of Internal Medicine and Radboud Community for Infectious Diseases (RCI), Radboud University Medical Center, Nijmegen, The Netherlands.ORCID http://orcid.org/0000-0002-6607-4075
Krista E van MeijgaardenLeiden University Center for Infectious Diseases, Leiden University Medical Center, Leiden, The Netherlands.ORCID http://orcid.org/0000-0003-2818-9805
Mihai G NeteaDepartment of Internal Medicine and Radboud Community for Infectious Diseases (RCI), Radboud University Medical Center, Nijmegen, The Netherlands.ORCID http://orcid.org/0000-0003-2421-6052
Simone A JoostenLeiden University Center for Infectious Diseases, Leiden University Medical Center, Leiden, The Netherlands.ORCID http://orcid.org/0000-0002-9878-0863
Valerie A C M KoekenDepartment of Internal Medicine and Radboud Community for Infectious Diseases (RCI), Radboud University Medical Center, Nijmegen, The Netherlands.
Philip C HillCentre for International Health, University of Otago, Dunedin, New Zealand.
Reinout van CrevelDepartment of Internal Medicine and Radboud Community for Infectious Diseases (RCI), Radboud University Medical Center, Nijmegen, The Netherlands. Reinout.vanCrevel@radboudumc.nl.ORCID http://orcid.org/0000-0002-6233-6410

Funding

EC | Seventh Framework Programme (EC Seventh Framework Programm) FP7/2007-2013Koninklijke Nederlandse Akademie van Wetenschappen (Royal Netherlands Academy of Arts and Sciences) 09-PD-14Nederlandse Organisatie voor Wetenschappelijk Onderzoek (Netherlands Organisation for Scientific Research) 017.106.310
6 · The paper itself

Abstract

A significant proportion of individuals who are heavily exposed to infectious tuberculosis patients do not acquire Mycobacterium tuberculosis (Mtb) infection, as detected by an interferon gamma release assay (IGRA). We examined circulating metabolite profiles and metabolic genotypes in 199 heavily exposed IGRA-negative tuberculosis household contacts in Indonesia. Based on differentially abundant metabolites, activity of several pathways including arachidonic acid, arginine and proline, glutathione, and tryptophan metabolism, correlated with a negative IGRA at three months. SNPs near PRODH (involved in arginine and proline metabolism) were associated with circulating proline concentrations and persistently negative IGRA results, while SNPstudys near AFMID (involved in tryptophan metabolism) were associated with IGRA conversion. For further validation, plasma metabolomic profiles were correlated with mycobacterial growth inhibition by peripheral blood mononuclear cells from individuals in a low-incidence setting. Lower circulating concentrations of six metabolites, including leukotriene B4, proline, glycine, and tryptophan correlated with better growth control in non-exposed healthy individuals, as well as with stronger protection against IGRA-conversion in the Indonesian tuberculosis household contacts. Collectively, these data support the notion that circulating metabolites may impact innate host defense against Mtb infection, and that metabolic interventions may prevent tuberculosis infection and disease.

Indexed as

MetabolomeMycobacterium tuberculosisTuberculosisAdultFemaleHumansIndonesiaInterferon-gamma Release TestsMalePolymorphism, Single NucleotideProlineProline

Identifiers

PMID42162225
PMCPMC13470225

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.