Evidence map›Paper›PMID 42161927›Full record

ArticleNature communications2026

Multi-modal AI for comprehensive breast cancer prognostication.

Jan Witowski, Ken G Zeng, Joseph Cappadona, Jailan Elayoubi, Khalil Choucair, Elena Diana Chiru, Nancy Chan, Young-Joon Kang, Frederick Howard, Irina Ostrovnaya and 41 more

Abstract read
In one paragraph

Article in Nature communications, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

51 authors.

Jan WitowskiAtaraxis AI, New York, NY, USA.
Ken G ZengAtaraxis AI, New York, NY, USA.
Joseph CappadonaAtaraxis AI, New York, NY, USA.
Jailan ElayoubiKarmanos Cancer Institute, Detroit, MI, USA.
Khalil ChoucairKarmanos Cancer Institute, Detroit, MI, USA.
Elena Diana ChiruCancer Center Baselland, Basel, Liestal, Switzerland.ORCID http://orcid.org/0000-0001-6037-0714
Nancy ChanNYU Grossman School of Medicine, New York, NY, USA.
Young-Joon KangThe Catholic University of Korea, Seoul, South Korea.ORCID http://orcid.org/0000-0002-6546-0513
Frederick HowardUChicago Medicine, Chicago, IL, USA.ORCID http://orcid.org/0000-0002-6039-1141
Irina OstrovnayaMemorial Sloan Kettering Cancer Center, New York, NY, USA.
Carlos Fernandez-GrandaNYU Center for Data Science, New York, NY, USA.
Freya SchnabelNYU Grossman School of Medicine, New York, NY, USA.
Zoe SteinsnyderAtaraxis AI, New York, NY, USA.
Ugur OzerdemNYU Grossman School of Medicine, New York, NY, USA.
Kangning LiuNYU Center for Data Science, New York, NY, USA.
Waleed AbdulsattarKarmanos Cancer Institute, Detroit, MI, USA.
Yu ZongKarmanos Cancer Institute, Detroit, MI, USA.
Lina DaoudKarmanos Cancer Institute, Detroit, MI, USA.
Rafic BeydounKarmanos Cancer Institute, Detroit, MI, USA.
Anas M SaadKarmanos Cancer Institute, Detroit, MI, USA.ORCID http://orcid.org/0000-0003-0101-0131
Nitya ThakoreNYU Grossman School of Medicine, New York, NY, USA.ORCID http://orcid.org/0009-0006-6281-6795
Mohammad SadicNYU Grossman School of Medicine, New York, NY, USA.
Frank YeungNYU Grossman School of Medicine, New York, NY, USA.
Elisa LiuNYU Grossman School of Medicine, New York, NY, USA.
Theodore HillNYU Grossman School of Medicine, New York, NY, USA.ORCID http://orcid.org/0000-0002-0604-6451
Benjamin SwettNYU Grossman School of Medicine, New York, NY, USA.ORCID http://orcid.org/0009-0007-4463-9462
Danielle RigauNYU Grossman School of Medicine, New York, NY, USA.
Andrew J ClayburnNYU Grossman School of Medicine, New York, NY, USA.ORCID http://orcid.org/0000-0001-8729-1805
Valerie SpeirsThe University of Aberdeen, Aberdeen, Scotland.ORCID http://orcid.org/0000-0002-0602-4666
Marcus VetterCancer Center Baselland, Basel, Liestal, Switzerland.
Lina SojakCancer Center Baselland, Basel, Liestal, Switzerland.
Simone MuenstUniversity Hospital Basel, Basel, Liestal, Switzerland.
Daniel BaumhoerUniversity Hospital Basel, Basel, Liestal, Switzerland.ORCID http://orcid.org/0000-0002-2137-7507
Jia-Wern PanCancer Research Malaysia, Subang Jaya, Malaysia.ORCID http://orcid.org/0000-0003-0875-9831
Haslina MakmurCancer Research Malaysia, Subang Jaya, Malaysia.ORCID http://orcid.org/0000-0002-2893-4687
Soo-Hwang TeoCancer Research Malaysia, Subang Jaya, Malaysia.ORCID http://orcid.org/0000-0002-0444-590X
Linda M PakNYU Grossman School of Medicine, New York, NY, USA.
Victor AngelOmica.bio, Mexico City, Mexico.
Dovile Zilenaite-PetrulaitieneVilnius University, Vilnius, Lithuania.ORCID http://orcid.org/0000-0002-7221-2868
Arvydas LaurinaviciusVilnius University, Vilnius, Lithuania.ORCID http://orcid.org/0000-0001-9232-1730
Natalie KlarNYU Grossman School of Medicine, New York, NY, USA.
Brian D PieningProvidence Health, Renton, Washington, US.ORCID http://orcid.org/0000-0002-2683-8157
Carlo BifulcoProvidence Health, Renton, Washington, US.ORCID http://orcid.org/0000-0003-1922-6977
Sun-Young JunThe Catholic University of Korea, Seoul, South Korea.ORCID http://orcid.org/0000-0002-3007-2094
Jae Pak YiThe Catholic University of Korea, Seoul, South Korea.
Su Hyun LimThe Catholic University of Korea, Seoul, South Korea.
Adam BrufskyUniversity of Pittsburgh Medical Center, Pittsburgh, PA, USA.ORCID http://orcid.org/0000-0001-8080-7960
Francisco J EstevaNorthwell Health, New York, NY, USA.
Lajos PusztaiYale School of Medicine, New Haven, CT, USA.ORCID http://orcid.org/0000-0001-9632-6686
Yann LeCunNYU Center for Data Science, New York, NY, USA.
Krzysztof J GerasAtaraxis AI, New York, NY, USA. krzysztof.geras@nyulangone.org.

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Nicholas D Socci · 1985 to 2026
$347.4M
NCI NIH HHS P30 CA008748
6 · The paper itself

Abstract

Treatment selection in breast cancer is guided by risk assessment using molecular subtypes and clinicopathological characteristics. However, current approaches lack the precision required for optimal clinical decision-making. To address this, we use data from 8161 patients to develop and evaluate an AI test integrating digital pathology with clinical data. The AI test provides a robust method for predicting disease-free interval (C-index: 0.71 [0.68-0.75], HR: 3.63 [3.02-4.37, p < 0.001]). In a direct comparison, the AI test displays numerically higher discrimination (C-index: 0.67 [0.61-0.74]) than the standard-of-care 21-gene assay (C-index: 0.61 [0.49-0.73]). Across molecular subtypes, the AI test demonstrates robust prognostic performance, including in triple negative breast cancer (C-index: 0.71 [0.62-0.81], HR: 3.81 [2.35-6.17, p=0.02]), where no guideline-recommended assays currently exist. These findings highlight the potential of AI-based pathology tests as a promising tool for improved risk stratification across all major subtypes, with implications for clinical decision-making.

Indexed as

Artificial IntelligenceBreast NeoplasmsBiomarkers, TumorDisease-Free SurvivalFemaleHumansMiddle AgedPrognosisTriple Negative Breast NeoplasmsBiomarkers, Tumor

Identifiers

PMID42161927
PMCPMC13338129

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.