Evidence map›Paper›PMID 42161902›Full record

ArticleNature communications2026

Multivalent nanobodies for potent and broad neutralization of Staphylococcus aureus toxins.

Yong Joon Jeffrey Kim, Nicholas R Walton, Wei Huang, Madison Lee, Yufei Xiang, Zhe Sang, Chaya Sussman, Sarah K L Moore, Derek J Taylor, Kong Chen and 3 more

Abstract read
In one paragraph

Article in Nature communications, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors.

Yong Joon Jeffrey KimCenter for Protein Engineering and Therapeutics, Department of Pharmacological Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Nicholas R WaltonDepartment of Microbiology and Immunology, University of Western Ontario, London, ON, Canada.ORCID 0009-0006-5345-4550
Wei HuangDepartment of Pharmacology, Case Western Reserve University, Cleveland, OH, USA.
Madison LeeStony Brook University, New York, NY, USA.
Yufei XiangCenter for Protein Engineering and Therapeutics, Department of Pharmacological Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Zhe SangCenter for Protein Engineering and Therapeutics, Department of Pharmacological Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Chaya SussmanDivision of Pulmonary, Critical Care and Sleep Medicine, Department of Medicine, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Sarah K L MooreDivision of Pulmonary, Critical Care and Sleep Medicine, Department of Medicine, Icahn School of Medicine at Mount Sinai, New York, NY, USA.ORCID 0000-0003-2203-6568
Derek J TaylorDepartment of Pharmacology, Case Western Reserve University, Cleveland, OH, USA.ORCID 0000-0001-9932-1856
Kong ChenDivision of Pulmonary, Allergy, and Critical Care Medicine, Department of Medicine, University of Pittsburgh, Pittsburgh, PA, USA.
Jaime L HookDivision of Pulmonary, Critical Care and Sleep Medicine, Department of Medicine, Icahn School of Medicine at Mount Sinai, New York, NY, USA.ORCID 0000-0002-6630-0060
John K McCormickDepartment of Microbiology and Immunology, University of Western Ontario, London, ON, Canada.ORCID 0000-0003-3742-7289
Yi ShiCenter for Protein Engineering and Therapeutics, Department of Pharmacological Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA. wally.yis@gmail.com.ORCID 0000-0002-2761-8324

Funding

TRAINING PROGRAM IN CANCER THERAPYT32CA078207 · NCI · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI James J Manfredi · 1999 to 2026
$11.6M
Teaching biomedical and pharmacological trainees to produce FAIR data for AI & ML applicationsT32GM062754 · NIGMS · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI SCHLESSINGER, AVNER · 2001 to 2023
$6.2M
Mapping the Dynamic Interactome of Ig-fold Membrane Proteins Using Nanobody-Based ToolsR35GM137905 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI Yi Shi · 2020 to 2026
$2.8M
Research Supplement for Alveolar Responses to Viral Lung InfectionR01HL164821 · NHLBI · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI Jaime Lynn Hook · 2022 to 2026
$2.6M
Acquisition of 200kV Glacios Cryo Transmission Electron MicroscopeS10OD032437 · OD · CASE WESTERN RESERVE UNIVERSITY · PI CHAKRAPANI, SUDHA · 2022 to 2022
$2.0M
NCI NIH HHS T32 CA078207NHLBI NIH HHS R01 HL164821NIGMS NIH HHS R35 GM137905NIGMS NIH HHS T32 GM062754NIH HHS S10 OD032437NIH HHS S10OD032437-01
6 · The paper itself

Abstract

Staphylococcus aureus is a leading cause of lethal bacteremia and pneumonia, which are driven by potent virulence factors such as T-cell superantigens and alpha hemolysin. S. aureus has among the highest rates of antibiotic resistance, yet no vaccines or alternative therapies are available. Here, we developed a repertoire of potent, high-affinity nanobodies (Nbs) targeting key toxins in S. aureus infection, including Hla and superantigens SEB, SEC, and TSST-1. Comprehensive cryo-EM and AlphaFold3 analyses of these Nbs, which were elicited with clinical cocktail vaccines, revealed diverse neutralizing epitopes and mechanisms that provide insights for immunotherapy and vaccine strategies. Guided by these findings, we engineered stable, multivalent, and multifunctional Nb constructs. These constructs included an aerosolizable trimeric Nb with enhanced neutralization activity against Hla and SEC, and a decameric Nb-IgG-Fc fusion construct with pM or better potencies against a wide range of major toxins in S. aureus sepsis (SEB, SEC, TSST-1, and Hla). These multifunctional Nbs demonstrated protective activity in murine models of pneumonia and sepsis, underscoring their potential as versatile immunotherapies that address the complex virulence of S. aureus. Our work lays a foundation for precision immunotherapies beyond current treatment options to combat complex bacterial infections with multiple virulence mechanisms.

Indexed as

Antibodies, NeutralizingBacterial ToxinsSingle-Domain AntibodiesStaphylococcal InfectionsStaphylococcus aureusAnimalsCryoelectron MicroscopyEnterotoxinsEpitopesFemaleHumansMiceSepsisSuperantigensAntibodies, NeutralizingBacterial ToxinsEnterotoxinsEpitopesSingle-Domain AntibodiesSuperantigens

Identifiers

PMID42161902
PMCPMC13190736

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.