Evidence map›Paper›PMID 42157306›Full record

ArticleJournal of cheminformatics2026

CataCon: a contrastive graph representation learning framework for catalyst prediction.

Hua Shi, Yuzhe Wang, Shouzhen Song, Kefei Li, Wenjia Gao, Shuan Liu, Jianbo Qiao, Leyi Wei

Abstract read
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Article in Journal of cheminformatics, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

8 authors.

Hua Shi *School of Opto-Electronic and Communication Engineering, Xiamen University of Technology, Xiamen, China.
Yuzhe Wang *School of Software, Shandong University, Jinan, China.
Shouzhen SongSchool of Opto-Electronic and Communication Engineering, Xiamen University of Technology, Xiamen, China.
Kefei LiSchool of Software, Shandong University, Jinan, China.
Wenjia GaoSchool of Software, Shandong University, Jinan, China.
Shuan LiuSchool of Software, Shandong University, Jinan, China.
Jianbo QiaoSchool of Software, Shandong University, Jinan, China. jamble@mail.sdu.edu.cn.
Leyi WeiFaculty of Applied Sciences, Macao Polytechnic University, Macao, 999078, China. weileyi@sdu.edu.cn.

Funding

the National Natural Science Foundation of China 62372392the National Science and Technology Major Project of China 2023ZD0120903the Science and Technology Development Fund of Macau 0133/2024/RIB2
6 · The paper itself

Abstract

Catalysts accelerate chemical processes by lowering activation energy through alternative reaction pathways. However, existing prediction methods often struggle to capture intricate molecular information and overlook critical structural details such as atomic composition and bond topology. To address these challenges, we propose CataCon, a deep neural network framework grounded in contrastive learning. The model initially utilizes GraphSAGE to generate robust molecular graph embeddings for reactants, products, and candidate catalysts, thereby capturing their structural features comprehensively. Subsequently, a contrastive learning module constructs positive and negative sample pairs to align feature representations between reactant-product combinations and catalysts. This alignment enhances the model's capacity to identify potential interactions. Experimental results on public catalytic reaction datasets demonstrate that CataCon significantly outperforms baseline methods in catalyst classification tasks. Ablation studies further confirm the efficacy of combining graph representation learning with contrastive strategies for integrating multidimensional molecular information. Moreover, t-SNE visualization and interpretability analyses elucidate the underlying decision mechanisms of the model and provide novel perspectives for understanding the complex relationships among reaction components. Scientific contribution This study introduces CataCon, a novel contrastive graph representation learning framework designed to predict optimal catalysts for chemical reactions. This approach overcomes the limitations of existing methods that rely on simplistic catalyst labels by generating rich structural embeddings for all reaction components and aligning reaction and catalyst features through contrastive learning. By providing a powerful tool for the rational screening of catalyst candidates, CataCon achieves superior accuracy and has the potential to significantly accelerate materials discovery and optimize chemical synthesis.

Identifiers

PMID42157306
PMCPMC13371356

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.