Evidence map›Paper›PMID 42154046›Full record

ArticleCancer immunology, immunotherapy : CII2026

Decoding circulating neutrophil phenotypes in triple-negative breast cancer via optimized single-cell RNA sequencing.

Marcin Banacki, Krzysztof Pastuszak, Michał Sieczyński, Grażyna Suchodolska, Elżbieta Senkus, Iwona Inkielewicz-Stepniak, Anna Supernat, Anna Żaczek

Abstract read
In one paragraph

Article in Cancer immunology, immunotherapy : CII, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Marcin Banacki *Department of Pharmaceutical Pathophysiology, Faculty of Pharmacy, Medical University of Gdańsk, Gdansk, Poland.ORCID http://orcid.org/0009-0009-5930-1012
Krzysztof Pastuszak *Laboratory of Translational Oncology, Intercollegiate Faculty of Biotechnology of the University of Gdańsk and the Medical University of Gdańsk, Gdansk, Poland.ORCID http://orcid.org/0000-0002-5562-0114
Michał SieczyńskiLaboratory of Translational Oncology, Intercollegiate Faculty of Biotechnology of the University of Gdańsk and the Medical University of Gdańsk, Gdansk, Poland.ORCID http://orcid.org/0009-0006-7236-3910
Grażyna SuchodolskaDepartment of Oncology and Radiotherapy, Medical University of Gdańsk, Gdansk, Poland.ORCID http://orcid.org/0000-0002-4892-6852
Elżbieta SenkusDepartment of Oncology and Radiotherapy, Medical University of Gdańsk, Gdansk, Poland.ORCID http://orcid.org/0000-0001-6855-397X
Iwona Inkielewicz-StepniakDepartment of Pharmaceutical Pathophysiology, Faculty of Pharmacy, Medical University of Gdańsk, Gdansk, Poland.ORCID http://orcid.org/0000-0003-1676-2723
Anna SupernatLaboratory of Translational Oncology, Intercollegiate Faculty of Biotechnology of the University of Gdańsk and the Medical University of Gdańsk, Gdansk, Poland. anna.supernat@gumed.edu.pl.ORCID http://orcid.org/0000-0002-3113-0540
Anna ŻaczekLaboratory of Translational Oncology, Intercollegiate Faculty of Biotechnology of the University of Gdańsk and the Medical University of Gdańsk, Gdansk, Poland. azaczek@gumed.edu.pl.ORCID http://orcid.org/0000-0003-1482-6068

Funding

Narodowe Centrum Badań i Rozwoju, Poland 0059/L-11/2019Narodowym Centrum Nauki 2020/37/B/NZ7/02069
6 · The paper itself

Abstract

Neutrophils are emerging as key regulators of tumor biology, influencing cancer progression, immune evasion, and therapeutic response. However, their transcriptomic characterization remains challenging due to low RNA content, limiting confident discrimination from other leukocyte populations at the single-cell level. To address this, we developed a robust analytical framework for single-cell RNA sequencing data, calculating a neutrophil score for each cell based on two curated neutrophil marker gene panels and excluding cells expressing non-neutrophil marker genes.White blood cells were isolated from liquid biopsies of six triple-negative breast cancer (TNBC) patients and six non-malignant donors, sequenced, and analyzed to profile 84 neutrophils isolated from TNBC patients and 128 neutrophils isolated from control donors. TNBC neutrophils displayed significant upregulation of migration-associated genes (-log

Indexed as

NeutrophilsSequence Analysis, RNASingle-Cell AnalysisTriple Negative Breast NeoplasmsBiomarkers, TumorFemaleGene Expression ProfilingHumansPhenotypeSingle-Cell Gene Expression AnalysisBiomarkers, TumorBreast cancerNeutrophil identificationNeutrophilsSingle-cell RNA sequencing

Identifiers

PMID42154046
PMCPMC13388867

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.