Evidence map›Paper›PMID 42146602›Full record

ArticlebioRxiv : the preprint server for biology2026

Macrophage metabolism directs regenerative versus fibrotic healing through BMP signaling in the mouse digit tip.

Mimi C Sammarco, Siqi Liu, Ni Su, Madhumidha Ramesh, Charlotte Raymond, John Carleton, Anne Le, Alexander J Trostle, Robert J Tower, Jennifer Simkin

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Mimi C SammarcoDepartment of Orthopedic Surgery, Mayo Clinic, Rochester, MN, USA.
Siqi LiuDepartment of Microbiology, Immunology and Molecular Genetics, University of Kentucky, Lexington, KY, USA.
Ni SuDepartment of Biomedical Engineering, University of Kentucky, Lexington, KY, USA.
Madhumidha RameshDepartment of Microbiology, Immunology and Molecular Genetics, University of Kentucky, Lexington, KY, USA.
Charlotte RaymondDepartment of Orthopedic Surgery, Louisiana State University Health Sciences Center, New Orleans, LA, USA.
John CarletonDepartment of Orthopedic Surgery, Louisiana State University Health Sciences Center, New Orleans, LA, USA.
Anne LeGigantest, Inc. Baltimore, MD, USA.
Alexander J TrostleDepartment of Surgery, University of Texas Southwestern Medical Center, Dallas, TX, USA.
Robert J TowerDepartment of Surgery, University of Texas Southwestern Medical Center, Dallas, TX, USA.ORCID 0000-0001-5856-5758
Jennifer SimkinDepartment of Microbiology, Immunology and Molecular Genetics, University of Kentucky, Lexington, KY, USA.ORCID 0009-0005-2259-2531

Funding

Kentucky Center for Clinical and Translational ScienceUL1TR001998 · NCATS · UNIVERSITY OF KENTUCKY · PI HARTMANN, KATHERINE E, KERN, PHILIP A · 2016 to 2025
$34.2M
Mitochondrial function regulates ROS-mediated patterning following injuryR01HD112474 · NICHD · MAINEHEALTH · PI Anyonya R Guntur, Mimi C Sammarco · 2024 to 2026
$1.7M
Cellular metabolism at the crossroads of skeletal regenerationR01HD107034 · NICHD · TULANE UNIVERSITY OF LOUISIANA · PI Mimi C Sammarco · 2022 to 2026
$1.7M
Harnessing the inflammatory response to promote regeneration in mammalsR01HD116735 · NICHD · UNIVERSITY OF KENTUCKY · PI Jennifer Simkin · 2025 to 2026
$1.3M
NCATS NIH HHS UL1 TR001998NICHD NIH HHS R01 HD107034NICHD NIH HHS R01 HD112474NICHD NIH HHS R01 HD116735
6 · The paper itself

Abstract

Macrophages play a central role in determining the outcomes of healing, coordinating regeneration in some injuries and scar formation in others. In both cases, this coordination involves the cross-talk between macrophages and surrounding cells. But what drives the different cross-communication pathways to determine healing outcomes is not well known. In this study, we make use of the mouse digit tip amputation model, in which an amputation through the third phalangeal element (P3) is able to completely regenerate whereas an amputation through the second phalangeal element (P2) forms a scar. We identify a population of macrophages that is specific to the P3 regenerating digit. By integrating single-cell RNAseq, spatial transcriptomics, and metabolomic analyses, we show that this population localizes specifically to the growing bone front, express BMP ligands that drive downstream BMP activation in neighboring osteoblasts and is governed by a two-part metabolic switch involving increased fatty acid oxidation coupled with reduced glycolytic activity. This spatially restricted, BMP-expressing macrophage population is entirely absent in the scar-forming P2 injury, and our data indicate that environmental conditions unique to the regenerating digit are responsible for its emergence. Together these findings identify a regeneration-specific macrophage signaling center for patterned bone formation and suggest that targeting the metabolic conditions that drive this population could improve the efficacy of regenerative therapies.

Identifiers

PMID42146602
PMCPMC13174314

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.