Evidence map›Paper›PMID 42146520›Full record

ArticlebioRxiv : the preprint server for biology2026

Minding the gap: collective determinants of multiscale structure across interacting bacterial colonies.

Jacob Moran, Michael Hinczewski, Suraj Shankar, Kevin B Wood, Robert J Woods, Luis Zaman

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Jacob MoranDepartment of Ecology and Evolutionary Biology, University of Michigan.ORCID 0000-0001-7998-5524
Michael HinczewskiDepartment of Physics, Case Western Reserve University.ORCID 0000-0003-2837-7697
Suraj ShankarDepartment of Physics, University of Michigan.ORCID 0000-0002-4615-975X
Kevin B WoodDepartment of Biophysics, University of Michigan.ORCID 0000-0002-0985-7401
Robert J WoodsDepartment of Internal Medicine, University of Michigan.ORCID 0000-0002-0679-9998
Luis ZamanDepartment of Ecology and Evolutionary Biology, Center for the Study of Complex Systems, University of Michigan.ORCID 0000-0001-6838-7385

Funding

A multiscale approach to develop and apply fluoride efflux inhibitors to reverse oral dysbiosis and eliminate early childhood cariesRM1DE034220 · NIDCR · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Randy B. Stockbridge, Livia Maria Andalo Tenuta · 2024 to 2026
$3.3M
Spatiotemporal Dynamics of Collective Antibiotic Resistance in Microbial CommunitiesR35GM124875 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI WOOD, KEVIN · 2017 to 2024
$2.7M
NIDCR NIH HHS RM1 DE034220NIGMS NIH HHS R35 GM124875
6 · The paper itself

Abstract

A bacterial colony rarely exists in isolation - in natural habitats, colonies interact to form spatially structured communities across length and time scales. Eco-evolutionary feedbacks link these scales, such that structure at one level can influence another, yet the interplay between single- and multi-colony organization remains poorly understood. As a step toward addressing this, we develop a high-throughput platform to track population dynamics across spatially extended networks of colonies. A common structural feature observed at the multi-colony scale is the formation of a stable gap region between colonies, even when they are isogenic. Numerous studies observe similar patterns of behavior across species, with few resolving the underlying mechanism. Here, we ask: what are the minimal ingredients shaping this multi-colony structure? We focus on colonies of the opportunistic pathogen

Identifiers

PMID42146520
PMCPMC13174316

What OpenQuestion holds

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LicenceCC BY-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.