ArticlebioRxiv : the preprint server for biology2026
LIVIA: a browser-based tool for assessing and visualizing predicted protein interactions.
Article in bioRxiv : the preprint server for biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.
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Abstract
As protein structure prediction tools become widely adopted across biology, there is a growing need for accessible methods to assess and visualize predicted protein-protein interactions (PPIs). Here we present LIVIA (Local Interaction Visualization and Analysis), a browser-based tool that computes local PPI confidence metrics across multiple prediction platforms, identifies predicted interface residues, embeds an interactive Mol* 3D viewer, and generates visualization scripts for ChimeraX and PyMOL. The tool automatically detects prediction formats; all parsing and computation occur locally on the user's machine. LIVIA is freely available at https://flyark.github.io/LIVIA.
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