Evidence map›Paper›PMID 42143385›Full record

ArticleBMC research notes2026

Characterization of a newly isolated Dhillonvirus bacteriophage vB_EcoS-UDS3lw against Escherichia coli O157:H7.

Yen-Te Liao, Abigail R Arellano, Yujie Zhang, Vivian C H Wu

Abstract read
In one paragraph

Article in BMC research notes, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Yen-Te Liao *U.S. Department of Agriculture, Agricultural Research Service, Western Regional Research Center, Produce Safety and Microbiology Research Unit, Albany, CA, 94710, USA.
Abigail R Arellano *U.S. Department of Agriculture, Agricultural Research Service, Western Regional Research Center, Produce Safety and Microbiology Research Unit, Albany, CA, 94710, USA.
Yujie ZhangU.S. Department of Agriculture, Agricultural Research Service, Western Regional Research Center, Produce Safety and Microbiology Research Unit, Albany, CA, 94710, USA.
Vivian C H WuU.S. Department of Agriculture, Agricultural Research Service, Western Regional Research Center, Produce Safety and Microbiology Research Unit, Albany, CA, 94710, USA. vivian.wu@usda.gov.

Funding

Agricultural Research Service 2030-42000-055-000-D
6 · The paper itself

Abstract

objectiveThe aim of this study is to characterize a new Dhillonvirus bacteriophage that is lytic against E. coli strains, particularly E. coli O157:H7. Methods used for characterization included bacteriophage isolation, purification, bacteriophage morphology, host range test, one-step growth curve, whole-genome sequencing and analysis, and preliminary determination of depolymerase activity.

resultsThe complete genome sequence of Escherichia phage vB EcoS UDS3lw consists of double-stranded DNA, with a genome length of 44,071 base pairs and GC content of 54.67%. UDS3lw did not contain bacterial virulence genes, such as stx, or lysogenic genes in the phage genome. The phylogenetic analysis at the nucleotide level revealed that UDS3lw shared a close evolutionary relationship with Escherichia phages SM S22 and SSL-2009a, belonging to the Dhillonvirus genus. UDS3lw has a narrow host spectrum against E. coli O157:H7 and some non-pathogenic E. coli strains. Despite a small burst size of 2.4 PFU/cell on E. coli O157:H7 (RM9995), UDS3lw encodes a tail fiber protein (ORF 31) with depolymerase activity against non-pathogenic E. coli and most E. coli O157 strains. The findings provide insights into the genetic and biological diversity of the E. coli-infecting phage UDS3lw, which exhibits depolymerase activity and holds promise for further development as an anti-biofilm agent.

Indexed as

BacteriophagesColiphagesEscherichia coli O157Genome, ViralHost SpecificityPhylogenyDepolymerase activityDhillonvirus phageE. coli O157:H7

Identifiers

PMID42143385
PMCPMC13348001

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.