Evidence map›Paper›PMID 42138723›Full record

ArticleMolecular genetics and genomics : MGG2026

The antibacterial activity and plant growth-promoting potential of Streptomyces lopnurensis TRM49590 based on whole-genome mining.

Jiali Lu, Jiayue Yuan, Shuyu Xue, Rui Zhang, Yanlei Zhu, Shasha Gong, Bei Zheng

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Article in Molecular genetics and genomics : MGG, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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4 · The record

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5 · Who and what money

Authors and funding

7 authors.

Jiali Lu *College of Life Science, Xinjiang Normal University, Urumqi, 830054, China.
Jiayue Yuan *College of Life Science, Xinjiang Normal University, Urumqi, 830054, China.
Shuyu XueCollege of Life Science, Xinjiang Normal University, Urumqi, 830054, China.
Rui ZhangCollege of Life Science, Xinjiang Normal University, Urumqi, 830054, China.
Yanlei ZhuCollege of Life Science, Xinjiang Normal University, Urumqi, 830054, China.
Shasha GongCollege of Life Science, Xinjiang Normal University, Urumqi, 830054, China.
Bei ZhengCollege of Life Science, Xinjiang Normal University, Urumqi, 830054, China. zhengbei19890119@163.com.ORCID http://orcid.org/0009-0008-9742-3857

Funding

Natural Science Foundation of Xinjiang Uygur Autonomous Region 2022D01D42Natural Science Foundation of Xinjiang Uygur Autonomous Region 2024D01B50
6 · The paper itself

Abstract

The Streptomyces lopnurensis TRM49590, isolated from the sedimentary deposits of Lop Nur, Xinjiang, China, thrives in an extreme environment marked by high salinity and intense radiation. This unique habitat endows it with a high potential for producing novel and bioactive secondary metabolites. This study explored its growth-promoting characteristics and the antimicrobial activity against the plant disease pathogens based on whole-genome mining. The whole-genome annotation revealed an abundance of gene clusters associated with plant growth promotion and environmental adaptation in S. lopnurensis TRM49590. A total of 24 active secondary metabolite Bio-synthetic Gene Clusters (smBGCs) capable of synthesizing known or novel compounds were identified using antiSMASH 8.0 and BAGEL 4. These findings suggest the potential of S. lopnurensis TRM49590 to produce novel secondary metabolites with both antimicrobial and herbicidal activities. Furthermore, S. lopnurensis TRM49590 exhibits capabilities in nitrogen fixation, potassium solubilization, and the secretion of multiple extracellular enzymes, significant inhibitory effects on Fusarium oxysporum f. sp. Vasinfectum ATCC 31083 and Verticillium dahliae ATCC 36211, further substantiating its potential in promoting plant growth and enhancing plant resistance. This study provides the necessary theoretical basis for the development and practical application of S. lopnurensis TRM49590.

Indexed as

Anti-Bacterial AgentsPlant DevelopmentStreptomycesFusariumGenome, BacterialMultigene FamilyPlant DiseasesSecondary MetabolismVerticilliumAnti-Bacterial AgentsAntimicrobial propertiesBio-synthetic gene clusterGenome miningGrowth-promotingStreptomyces lopnurensis TRM49590

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.