Evidence map›Paper›PMID 42134135›Full record

ArticlePoultry science2026

Integrated transcriptomics and metagenomics analyze the dynamic correlations between cecal mucosal tissue and cecal microbiota in Liangshan Yanying chickens during early postnatal development.

Zengwen Huang, Jing Wang, Chaoyun Yang, Zengpeng Lv, Runjin Wang

Abstract read
In one paragraph

Article in Poultry science, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

5 authors.

Zengwen HuangXichang University, Xichang, Sichuan, China.
Jing WangXichang University, Xichang, Sichuan, China.
Chaoyun YangXichang University, Xichang, Sichuan, China.
Zengpeng LvChina Agricultural University, Beijing, China. Electronic address: lvzengpeng310@cau.edu.cn.
Runjin WangShannan Livestock and Poultry Breeding Center (Shannan Tibetan Chicken Industry Research Institute), Shannan, Tibet, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Liangshan Yanying chicken, a precious indigenous Chinese breed listed in the Catalog of Livestock and Poultry Genetic Resources in China, is an economic pillar in Liangshan Yi ethnic area and critical for poverty alleviation-to-rural revitalization transition. It has excellent phenotypic traits, high nutritional value, unique flavor, and strong adaptability to 380-4500 m altitudes. However, the co-evolutionary mechanism between its cecal mucosal tissue and gut microbiota (key to intestinal homeostasis and productivity) remains unclear. We systematically investigated their dynamic crosstalk in 1-, 14-, and 28-day-old chickens (n = 10/group) using transcriptomics, metagenomics, bioinformatics, and qPCR. Cecal length increased from 3.77 cm (1 d) to 8.98 cm (28 d), with higher growth rate at 14-28 d. We identified 67 DEGs (34 upregulated immune-related, 33 downregulated development-related) and 16 dynamically changed microbial taxa. Host-microbiota crosstalk was mediated by 52 shared KEGG pathways, with 10 core genes and 13 functional taxa maintaining homeostasis via PI3K-Akt pathway. This study first reveals a "gut microbial homeostasis" model for cecal dynamic homeostasis, providing insights for local poultry intestinal health and breeding.

Indexed as

CecumChickensGastrointestinal MicrobiomeIntestinal MucosaTranscriptomeAnimalsChinaGene Expression ProfilingMetagenomicsCecal microbiotaCecal mucosal tissueLiangshan Yanying chickenMetagenomicsTranscriptomics

Identifiers

PMID42134135
PMCPMC13196523

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.