Evidence map›Paper›PMID 42133662›Full record

ArticleVirulence2026

Integrated transcriptomic, molecular docking, and mendelian randomization analysis reveal a microbial-propionate-JUN pathway in renal ischemia-reperfusion injury.

Jun Li, Ruizhen Huang, Xing Wang, Yunfeng Zhang, Zuhuan Xu, Penglin Zhang, Honglin Hu

Abstract read
In one paragraph

Article in Virulence, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Jun LiDepartment of Urology, The Second Affiliated Hospital, Jiangxi Medical College, Nanchang University, Nanchang, China.ORCID 0000-0001-8560-9306
Ruizhen HuangDepartment of Urology, The Second Affiliated Hospital, Jiangxi Medical College, Nanchang University, Nanchang, China.
Xing WangDepartment of Urology, The Second Affiliated Hospital, Jiangxi Medical College, Nanchang University, Nanchang, China.
Yunfeng ZhangDepartment of Urology, The Second Affiliated Hospital, Jiangxi Medical College, Nanchang University, Nanchang, China.
Zuhuan XuDepartment of Urology, The Second Affiliated Hospital, Jiangxi Medical College, Nanchang University, Nanchang, China.
Penglin ZhangDepartment of Urology, The Second Affiliated Hospital, Jiangxi Medical College, Nanchang University, Nanchang, China.
Honglin HuDepartment of Urology, The Second Affiliated Hospital, Jiangxi Medical College, Nanchang University, Nanchang, China.ORCID 0000-0001-9885-7405

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Renal ischemia-reperfusion injury (IRI) is a major cause of acute kidney injury and is characterized by oxidative stress, immune cell infiltration, and inflammatory signaling activation. Although gut microbiota and their metabolites, especially short-chain fatty acids, are involved in systemic immune regulation, their role in renal IRI remains unclear. Here, we integrated transcriptomic analysis, gut-derived metabolite target prediction, molecular docking, and Mendelian randomization (MR) to explore potential microbiota-metabolite-host regulatory mechanisms in renal IRI. We identified 32 target genes of gut-derived metabolites using the gutMGene, Similarity Ensemble Approach, and SwissTargetPrediction databases. In two renal IRI datasets (GSE126805 and GSE90861), 263 and 641 differentially expressed genes were identified, respectively, and hub genes were mainly enriched in the TNF and IL-17 signaling pathways. Among them, JUN was identified as a key hub linking gut microbiota-associated metabolites to renal inflammatory signaling. MR analysis showed that

Indexed as

Acute Kidney InjuryGastrointestinal MicrobiomeKidneyProto-Oncogene Proteins c-junReperfusion InjuryAnimalsGene Expression ProfilingHumansMolecular Docking SimulationSignal TransductionTranscriptomeProto-Oncogene Proteins c-jungut–kidney axismendelian randomizationmolecular dockingRenal ischemia-reperfusion injuryshort-chain fatty acids

Identifiers

PMID42133662
PMCPMC13179003

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.