Evidence map›Paper›PMID 42131305›Full record

ArticleFrontiers in cellular and infection microbiology2026

Ecological patterns of the gut mycobiome and microbiome in ulcerative colitis across life stages.

Francesca Toto, Sabrina Cardile, Matteo Scanu, Valeria Marzano, Valentina Petito, Letizia Masi, Pierluigi Puca, Valentina Giorgio, Tommaso Alterio, Antonella Diamanti and 5 more

Abstract read
In one paragraph

Article in Frontiers in cellular and infection microbiology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Francesca TotoUnit of Microbiome, Bambino Gesù Children's Hospital, IRCCS, Rome, Italy.
Sabrina CardileDigestive Diseases and Nutritional Rehabilitation Clinical Unit, Nutritional Treatments in Complex Diseases Research Unit, Bambino Gesù Children's Hospital, IRCCS, Rome, Italy.
Matteo ScanuUnit of Microbiome, Bambino Gesù Children's Hospital, IRCCS, Rome, Italy.
Valeria MarzanoUnit of Microbiome, Bambino Gesù Children's Hospital, IRCCS, Rome, Italy.
Valentina PetitoCeMAD Translational Research Laboratories, Centro Malattie Apparato Digerente, Dipartimento di Scienze Mediche e Chirurgiche, Fondazione Policlinico Universitario "A. Gemelli", IRCCS, Rome, Italy.
Letizia MasiCeMAD Translational Research Laboratories, Centro Malattie Apparato Digerente, Dipartimento di Scienze Mediche e Chirurgiche, Fondazione Policlinico Universitario "A. Gemelli", IRCCS, Rome, Italy.
Pierluigi PucaDipartimento di Medicina Traslazionale e Chirurgia, Università Cattolica del Sacro Cuore, Rome, Italy.
Valentina GiorgioUOSD Spina Bifida e Altre Branche Specialistiche, Department of Woman and Child Health and Public Health, Fondazione Policlinico Universitario "A. Gemelli" IRCCS, Università Cattolica del Sacro Cuore, Rome, Italy.
Tommaso AlterioHepatology and Liver transplantation Unit, Bambino Gesù Children's Hospital, IRCCS, Rome, Italy.
Antonella DiamantiDigestive Diseases and Nutritional Rehabilitation Clinical Unit, Nutritional Treatments in Complex Diseases Research Unit, Bambino Gesù Children's Hospital, IRCCS, Rome, Italy.
Paola De AngelisGastroenterology, Digestive Endoscopy and Nutrition Unit, Bambino Gesù Children's Hospital, IRCCS, Rome, Italy.
Loris Riccardo LopetusoIBD unit, Centro Malattie Apparato Digerente, Dipartimento di Scienze Mediche e Chirurgiche, Fondazione Policlinico Universitario "A. Gemelli", IRCCS, Rome, Italy.
Franco ScaldaferriCeMAD Translational Research Laboratories, Centro Malattie Apparato Digerente, Dipartimento di Scienze Mediche e Chirurgiche, Fondazione Policlinico Universitario "A. Gemelli", IRCCS, Rome, Italy.
Lorenza PutignaniDepartment of Life Science, Health, and Health Professions, Link Campus University, Rome, Italy.
Federica Del ChiericoUnit of Microbiome, Bambino Gesù Children's Hospital, IRCCS, Rome, Italy.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: Age-related variations in the gut microbial communities may influence immune regulation and inflammatory processes in inflammatory bowel diseases (IBD). However, distinguishing age effects from differences in clinical characteristics remains challenging. Methods: We investigated life-stage-associated patterns of the gut microbiome and mycobiome while accounting for clinical heterogeneity between paediatric and adult ulcerative colitis (UC) populations. We analysed 73 targeted metagenomes of bacteria and 69 targeted metagenomes of fungi from 26 paediatric and 47 adult patients with UC. Microbial diversity metrics and multivariate analyses were applied to evaluate community variation, and mucosal immune markers were assessed by ELISA. Clinical variables, including disease activity, duration, and treatment exposure, were considered when interpreting age-related microbial differences. Results: Fungal communities exhibited higher richness in adults and formed distinct age-related clusters in beta-diversity analyses, whereas bacterial composition remained largely comparable across age groups. Children were enriched in inflammation-associated fungi (Saccharomycetes, Discussion: Age-related variation was more evident in fungal than bacterial communities, suggesting that host developmental and immunological factors contribute to mycobiome configuration beyond clinical imbalance alone. Together, these findings indicate that life stage is linked to ecological variation of the gut mycobiome and mucosal immune responses in UC, while bacterial communities appear primarily shaped by disease-related factors. The transition from childhood to adulthood may represent a critical window of host-fungal interaction relevant for age-tailored microbiome-based strategies.

Indexed as

Colitis, UlcerativeFungiGastrointestinal MicrobiomeMycobiomeAdolescentAdultAge FactorsBacteriaBiodiversityChildChild, PreschoolDysbiosisFecesFemaleHumansMaleMuramidaseFaecalibacterium prausnitziigut microbiotagut mycobiotainflammatory bowel diseases (IBD)intestinal dysbiosislysozymeSIgAulcerative colitis

Identifiers

PMID42131305
PMCPMC13161133

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.