Evidence map›Paper›PMID 42129174›Full record

ArticleNature communications2026

Reprogramming gut microenvironment for the treatment of acute severe ulcerative colitis via a synergistic therapy of necroptosis blockade and organoid transplantation.

Qifeng Deng, Jiru Liu, Jian Shen, Sidi Yang, Xin Zhao, Wenru Wang, Jianru Lu, Lihong Liu, Liang Zhou, Sihui Cai and 3 more

Abstract read
In one paragraph

Article in Nature communications, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Qifeng Deng *MOE Key Laboratory of Gene Function and Regulation, Center of Evolutionary Synthetic Biology, School of Life Sciences of Sun Yat-sen University, Guangzhou, China.
Jiru Liu *MOE Key Laboratory of Gene Function and Regulation, Center of Evolutionary Synthetic Biology, School of Life Sciences of Sun Yat-sen University, Guangzhou, China.
Jian ShenCentral Laboratory, The Affiliated Panyu Central Hospital, Guangzhou Medical University, Guangzhou, China.
Sidi YangGuangzhou National Laboratory, Guangzhou, China.
Xin ZhaoMOE Key Laboratory of Gene Function and Regulation, Center of Evolutionary Synthetic Biology, School of Life Sciences of Sun Yat-sen University, Guangzhou, China.
Wenru WangMOE Key Laboratory of Gene Function and Regulation, Center of Evolutionary Synthetic Biology, School of Life Sciences of Sun Yat-sen University, Guangzhou, China.
Jianru LuMOE Key Laboratory of Gene Function and Regulation, Center of Evolutionary Synthetic Biology, School of Life Sciences of Sun Yat-sen University, Guangzhou, China.
Lihong LiuGuangzhou National Laboratory, Guangzhou, China.
Liang ZhouMOE Key Laboratory of Gene Function and Regulation, Center of Evolutionary Synthetic Biology, School of Life Sciences of Sun Yat-sen University, Guangzhou, China.
Sihui CaiMOE Key Laboratory of Gene Function and Regulation, Center of Evolutionary Synthetic Biology, School of Life Sciences of Sun Yat-sen University, Guangzhou, China.
Linsen ZengMOE Key Laboratory of Gene Function and Regulation, Center of Evolutionary Synthetic Biology, School of Life Sciences of Sun Yat-sen University, Guangzhou, China.
Xiaoqian ZhouDepartment of Gastrointestinal Surgery, The First People's Hospital of Gui Yang, Gui Yang, China.
Jun CuiMOE Key Laboratory of Gene Function and Regulation, Center of Evolutionary Synthetic Biology, School of Life Sciences of Sun Yat-sen University, Guangzhou, China. cuij5@mail.sysu.edu.cn.ORCID http://orcid.org/0000-0002-8000-3708

Funding

National Natural Science Foundation of China (National Science Foundation of China) 32270922National Natural Science Foundation of China (National Science Foundation of China) 82202534
6 · The paper itself

Abstract

Acute severe ulcerative colitis (ASUC) now imposes an increasing global burden, yet lacks broadly effective therapeutic options. While organoid transplantation represents a promising approach for intestinal injuries, its efficacy for ASUC treatment remains suboptimal. Here, we elucidate the intrinsic mechanism of RIPK1 involvement in necroptosis initiation, and further develop an organoid-based dual-axis therapeutic paradigm for ASUC. We identified that RIPK1 undergoes PIAS1-catalyzed SUMO1 modification at lysine 305, which promotes its compartmentalization within phase-separated structures, thereby serving as nucleation platforms for accelerating RIPK3 amyloid fibril assembly. Interfering with phase separation of RIPK1 suppresses necroptosis in intestinal cells and colonic organoids in vitro, as well as alleviates intestinal injury and reduces mortality in vivo. Notably, while colonic organoid transplantation showed limited therapeutic efficacy in ASUC, a synergistic therapy combining necroptosis blockade and organoid transplantation effectively reduced inflammatory damage and enhanced epithelial regeneration by reprogramming the intestinal microenvironment. These findings suggest that the SUMO1-RIPK1 axis functions as a druggable checkpoint governing necroptotic cell fate and presents a clinically actionable strategy to potentiate regenerative medicine paradigms in ASUC pathogenesis.

Indexed as

Colitis, UlcerativeNecroptosisOrganoidsAnimalsCellular MicroenvironmentColonDisease Models, AnimalHumansIntestinal MucosaMiceMice, Inbred C57BLReceptor-Interacting Protein Serine-Threonine KinasesSUMO-1 ProteinReceptor-Interacting Protein Serine-Threonine KinasesRipk3 protein, mouseSUMO-1 Protein

Identifiers

PMID42129174
PMCPMC13381547

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.