Evidence map›Paper›PMID 42121266›Full record

ArticleJournal of translational medicine2026

Deep learning-based 3D leukocyte differentiation using label-free higher harmonic generation microscopy.

Mengyao Zhou, Patrick José González, Tamara Dekker, Shiqi Zhang, Leonoor S Boers, Hélène B van den Heuvel, Annemiek Dijkhuis, Iris A Simons, Jan Willem Duitman, Marie Louise Groot

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Article in Journal of translational medicine, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

10 authors.

Mengyao ZhouFaculty of Science, Department of Physics, Laserlab, Vrije Universiteit Amsterdam, De Boelelaan, Amsterdam, 1105, 1081HV, The Netherlands. mengyao.zhou@maastrichtuniversity.nl.ORCID 0000-0003-1759-993X
Patrick José GonzálezFaculty of Science, Department of Physics, Laserlab, Vrije Universiteit Amsterdam, De Boelelaan, Amsterdam, 1105, 1081HV, The Netherlands.
Tamara DekkerDepartment of Experimental Immunology, Amsterdam UMC, location University of Amsterdam, Amsterdam, The Netherlands.
Shiqi ZhangIntensive Care Medicine, Amsterdam UMC, location University of Amsterdam, Amsterdam, The Netherlands.
Leonoor S BoersIntensive Care Medicine, Amsterdam UMC, location University of Amsterdam, Amsterdam, The Netherlands.
Hélène B van den HeuvelIntensive Care Medicine, Amsterdam UMC, location University of Amsterdam, Amsterdam, The Netherlands.
Annemiek DijkhuisDepartment of Experimental Immunology, Amsterdam UMC, location University of Amsterdam, Amsterdam, The Netherlands.
Iris A SimonsDepartment of Experimental Immunology, Amsterdam UMC, location University of Amsterdam, Amsterdam, The Netherlands.
Jan Willem DuitmanDepartment of Experimental Immunology, Amsterdam UMC, location University of Amsterdam, Amsterdam, The Netherlands.
Marie Louise GrootFaculty of Science, Department of Physics, Laserlab, Vrije Universiteit Amsterdam, De Boelelaan, Amsterdam, 1105, 1081HV, The Netherlands.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundBoth in clinical practice and translational research, cell differentiation of leukocytes provides important diagnostic information and insights into pathophysiological mechanisms. The current gold-standard method for bronchoalveolar lavage fluid (BALF) analysis involves histochemical staining of cytospins, followed by manual morphological quantification. This approach however is labor-intensive, time-consuming, and highly operator-dependent, limiting its efficiency and throughput. This study proposes a deep learning framework for rapid, automated 3D leukocyte differentiation using label-free higher harmonic generation microscopy (HHGM).

methods3D leukocyte imaging was performed with label-free HHGM in a few minutes. Two deep learning models, ResNet 3D-50 and Vision Transformer (ViT) 3D, were trained, validated and tested for leucocyte differentiation on both BALF and blood fraction samples from 16 interstitial lung disease (ILDs) and 19 acute respiratory distress syndrome (ARDS) patients. Deep-learning model-prediction and cytospin analysis were performed by separate investigators. The results were compared using Bland-Altman analysis.

resultsThe proposed framework achieved accuracies above 86% for BALF and above 96% for blood samples under five-fold cross-validation. The approach shows close agreement with gold-standard cytological analyses, with mean differences of <5% across leukocyte subpopulations.

conclusionsBy integrating the label-free imaging capabilities of HHGM with deep learning, this study established a fast, accurate and high-throughput leukocyte differentiation in fresh BALF and blood samples. By significantly improving efficiency and reproducibility, this technology has the potential to transform clinical workflows and advance precision medicine.

Indexed as

Cell DifferentiationDeep LearningImaging, Three-DimensionalLeukocytesMicroscopyBronchoalveolar Lavage FluidHumansReproducibility of ResultsBlood fractionBroncho-alveolar lavage fluid (BALF)Deep learningHigher harmonic generation microscopy (HHGM)Leukocyte differentiation

Identifiers

PMID42121266
PMCPMC13334751

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.