Evidence map›Paper›PMID 42121171›Full record

ArticleBMC health services research2026

Operational performance of GeneXpert for tuberculosis diagnosis in West Java province, Indonesia: a public health evaluation.

Gerine Nijman, Almira Alifia, Salma Nur Annisa, Lily Shurianto, Ingrid E de Boer, Iis Puspitasari, Silvi Indriani, Bachti Alisjahbana, Reinout van Crevel, Philip C Hill and 1 more

Abstract read
In one paragraph

Article in BMC health services research, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Gerine NijmanDepartment of Internal Medicine, Radboud Community for Infectious Diseases (RCI), Radboud University Medical Centre, Geert Grooteplein Zuid 10, Nijmegen, 6525 GA, The Netherlands.
Almira AlifiaTuberculosis Working Group, Infectious Disease Research Centre, Jalan Professor Eyckman No. 38, Kota Bandung, Jawa Barat, 40161, Indonesia.
Salma Nur AnnisaTuberculosis Working Group, Infectious Disease Research Centre, Jalan Professor Eyckman No. 38, Kota Bandung, Jawa Barat, 40161, Indonesia.
Lily ShuriantoTuberculosis Working Group, Infectious Disease Research Centre, Jalan Professor Eyckman No. 38, Kota Bandung, Jawa Barat, 40161, Indonesia.
Ingrid E de BoerDepartment of Internal Medicine, Radboud Community for Infectious Diseases (RCI), Radboud University Medical Centre, Geert Grooteplein Zuid 10, Nijmegen, 6525 GA, The Netherlands.
Iis PuspitasariTuberculosis Working Group, Infectious Disease Research Centre, Jalan Professor Eyckman No. 38, Kota Bandung, Jawa Barat, 40161, Indonesia.
Silvi IndrianiTuberculosis Working Group, Infectious Disease Research Centre, Jalan Professor Eyckman No. 38, Kota Bandung, Jawa Barat, 40161, Indonesia.
Bachti AlisjahbanaTuberculosis Working Group, Infectious Disease Research Centre, Jalan Professor Eyckman No. 38, Kota Bandung, Jawa Barat, 40161, Indonesia.
Reinout van CrevelDepartment of Internal Medicine, Radboud Community for Infectious Diseases (RCI), Radboud University Medical Centre, Geert Grooteplein Zuid 10, Nijmegen, 6525 GA, The Netherlands.
Philip C Hill *Centre for International Health, Division of Health Sciences, University of Otago, 55 Hanover Street, Dunedin, 9016, New Zealand.
Bony Wiem Lestari *Tuberculosis Working Group, Infectious Disease Research Centre, Jalan Professor Eyckman No. 38, Kota Bandung, Jawa Barat, 40161, Indonesia. bony.wiem@unpad.ac.id.

Funding

Radboud Universitair Medisch Centrum R0006111
6 · The paper itself

Abstract

backgroundGeneXpert is instrumental in tuberculosis diagnosis. Operational challenges are widely reported, but comprehensive evaluations of its operational performance are rare.

methodsWe conducted a health facility survey in 40 community health centres with GeneXpert machines in West Java, Indonesia, and interviewed nurses, laboratory technicians, and program officers. We developed indicators and data collection tools using the World Health Organization GeneXpert implementation manual and Consolidated Framework for Implementation Research.

resultsGeneXpert has been implemented across the system with variable success. Several indicators were scored relatively low, which included facilities with Xpert-trained nurses (42%), samples referred from private providers (2%), samples transported in ≤ 1 day (61%), facilities with annual test volumes ≥ 3000 (16%), error rates ≤ 3% (46%), no result rates ≤ 1% (66%), absence of cartridge stockouts (72%) or machine module failure (37%), and annual machine calibration (58%). Barriers spanned multiple domains and layers. At Community Health Centres (CHCs), these included understaffing, geographical constraints, and digital infrastructure. Good communication shared at the stakeholders level and pre-assessments prior to GeneXpert deployment were identified as facilitators to GeneXpert utilisation.

conclusionThe Indonesian TB program has made significant progress in GeneXpert implementation. However, improving GeneXpert utilisation requires multisectoral solutions and underscores the need to address real-world constraints in the design and implementation of new TB diagnostics.

Indexed as

TuberculosisCommunity Health CentersHumansIndonesiaMycobacterium tuberculosisPublic HealthRapid Diagnostic TestsDiagnosisOperational performanceRapid molecular testTuberculosis

Identifiers

PMID42121171
PMCPMC13339502

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.