Evidence map›Paper›PMID 42120873›Full record

ArticleScientific data2026

A new genome assembly of the pea cultivar 'Caméor' provides resources for functional genomics and genetics.

Jonathan Kreplak, Petr Novák, Laura Ávila Robledillo, Grégoire Aubert, Baptiste Imbert, Parwinder Kaur, Quentin Gouil, Céline Lopez-Roques, Nathalie Rodde, Olivier Bouchez and 3 more

Abstract readDataset
In one paragraph

Article in Scientific data, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Jonathan KreplakUniversité Bourgogne Europe, Institut Agro Dijon, INRAE, UMR Agroécologie, Dijon, France.
Petr NovákBiology Centre, Czech Academy of Sciences, Ceske Budejovice, Czech Republic.
Laura Ávila RobledilloBiology Centre, Czech Academy of Sciences, Ceske Budejovice, Czech Republic.
Grégoire AubertUniversité Bourgogne Europe, Institut Agro Dijon, INRAE, UMR Agroécologie, Dijon, France.
Baptiste ImbertUniversité Bourgogne Europe, Institut Agro Dijon, INRAE, UMR Agroécologie, Dijon, France.
Parwinder KaurThe University of Western Australia, 35 Stirling Highway, 6009, Perth, Australia.
Quentin GouilEpigenetics and Development Division, The Walter and Eliza Hall Institute of Medical Research, Parkville, Victoria, Australia.
Céline Lopez-RoquesINRAE, GeT-PlaGe, Genotoul, 31326, Castanet-Tolosan, France.ORCID http://orcid.org/0000-0003-2529-7958
Nathalie RoddeINRAE CNRGV, 24 Chemin de Borde Rouge, Auzeville, CS 52627, 31326, Castanet Tolosan, France.ORCID http://orcid.org/0000-0003-3361-4730
Olivier BouchezINRAE, GeT-PlaGe, Genotoul, 31326, Castanet-Tolosan, France.ORCID http://orcid.org/0000-0002-7255-0058
Nadim TayehUniversité Bourgogne Europe, Institut Agro Dijon, INRAE, UMR Agroécologie, Dijon, France.
Jiří MacasBiology Centre, Czech Academy of Sciences, Ceske Budejovice, Czech Republic. macas@umbr.cas.cz.ORCID http://orcid.org/0000-0003-0829-1570
Judith BurstinUniversité Bourgogne Europe, Institut Agro Dijon, INRAE, UMR Agroécologie, Dijon, France. judith.burstin@inrae.fr.ORCID http://orcid.org/0000-0002-4125-3499

Funding

Agence Nationale de la Recherche (French National Research Agency) ANR-10-INBS-09Agence Nationale de la Recherche (French National Research Agency) ANR-11-BTBR-0002Agence Nationale de la Recherche (French National Research Agency) ANR20-PCPA-0008
6 · The paper itself

Abstract

Significant improvements in sequencing technologies have allowed the development of more contiguous genome assemblies in many plant species. The pea genome is characterized by its richness in repeated elements and its long and complex centromeres. This makes its assembly challenging. In this paper, we present an improved version of the genome sequence of the French cultivar 'Caméor'. This sequence was obtained by combining Nanopore and PacBio long-read sequencing, Hi-C contact maps and Bionano maps. The assembly of centromeres was refined using a combination of FISH and ultra-long Nanopore read analyses. Overall, the new Cameor_v2 genome assembly is a highly continuous pea genome assembly with small total gap size and a large contig N50. In this version, the orientation of chromosomes was revised according to internationally accepted karyotype rules. Gene annotation statistics indicated a high completeness of gene sequences, with most gene sequences with 3' and 5' UTR. This genome assembly with its associated data constitute a useful resource for pea genetics, comparative mapping and functional genomics.

Indexed as

Genome, PlantPisum sativumCentromereGenomics

Identifiers

PMID42120873
PMCPMC13389026

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.