Evidence map›Paper›PMID 42114037›Full record

ArticleJCO precision oncology2026

Generic Protocols for the Analytical Validation of Next-Generation Sequencing-Based Circulating Tumor DNA Assays, Version 2.0.

Angela Silvestro, Jonathan Baden, Kevin Billings, Kelli Bramlett, Adam Corner, Tyler Danek, Ina Deras, Jennifer Dickey, James H Godsey, Li Guan and 10 more

Abstract read
In one paragraph

Article in JCO precision oncology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors.

Angela SilvestroGSK, Waltham, MA.ORCID 0000-0002-6379-7999
Jonathan BadenBristol Myers Squibb, Lawrence Township, NJ.ORCID 0000-0002-9423-8305
Kevin BillingsStreck, La Vista, NE.
Kelli BramlettQuest Diagnostics, Secaucus, NJ.
Adam CornerBio-Rad, Pleasanton, CA.
Tyler DanekTempus AI, Chicago, IL.ORCID 0009-0002-6798-1408
Ina DerasFormerly with Illumina, San Diego, CA.
Jennifer DickeyLabcorp (PGDx), Baltimore, MD.
James H GodseyFormerly with Quest Diagnostics, Secaucus, NJ.
Li GuanIllumina, San Diego, CA.
Tyler HutchinsonFreenome, San Francisco, CA.ORCID 0000-0002-8175-4562
Donald J JohannUniversity of Arkansas, Little Rock, AR.ORCID 0009-0002-3173-6910
Jerry S H LeeUniversity of Southern California, Los Angeles, CA.ORCID 0000-0003-1515-0952
Cheng-Ho Jimmy LinFreenome, San Francisco, CA.
Jennifer S LococoIllumina, San Diego, CA.ORCID 0000-0002-7437-5177
Dorys Lopez RamosBLOODPAC, Chicago, IL.ORCID 0009-0008-1415-3135
Aaron O RichardsonFreenome, San Francisco, CA.
Daniel StetsonAstrazeneca, Wilmington, DE.ORCID 0000-0002-3961-2739
Paul WenzIllumina, San Diego, CA.
Lauren C LeimanBLOODPAC, Chicago, IL.ORCID 0009-0002-4374-7246

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Circulating tumor DNA (ctDNA) is a promising biomarker for cancer detection, treatment selection, and disease monitoring. As a result, an increasing number of diagnostic developers are pursuing liquid biopsy assays using next-generation sequencing (NGS) to detect ctDNA. To support clinical adoption, these assays must undergo rigorous analytical validation (AV) to facilitate regulatory approval, support market entry, and ultimately improve outcomes for patients with cancer. To this end, the BLOODPAC AV Working Group developed and published a set of generic AV protocols in September 2020. These included 11 protocols and 4 standard methods designed as a foundational resource for in vitro diagnostic developers, support validation discussions with regulatory bodies, promote alignment between pharmaceutical and diagnostic partners, and help reduce regulatory review cycles by standardizing expectations for study design. In 2023, after over 2 years of practical application, BLOODPAC launched an open comment period (April-July 2023) to gather user feedback. Nine institutions provided comments, which were reviewed by the Working Group and aggregated with feedback received from the (US) Food and Drug Administration via presubmission process. This input informed the development of the updated version to ensure the protocols remain practical, scientifically robust, and aligned with current technologies. This paper outlines the feedback process, reviews key challenges identified, and summarizes the resulting changes. It presents the second iteration (version 2.0) of the BLOODPAC generic AV protocols, reaffirming the consortium's commitment to maintaining their relevance, usability, and scientific rigor.

Indexed as

Circulating Tumor DNAHigh-Throughput Nucleotide SequencingNeoplasmsBiomarkers, TumorHumansLiquid BiopsyBiomarkers, TumorCirculating Tumor DNA

Identifiers

PMID42114037
PMCPMC13182804

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.