Evidence map›Paper›PMID 42113741›Full record

ArticleProteomics2026

iMPI: An Integrative Database for MicroProteins Encoded by Intron Retention in Tumors.

Jiamin Hu, Yongqiang Zheng, Xin Huang, Zhuoran Liang, Juntong Di, Bijin Cao, Lulu Wang, Junteng Li, Zhe Fu, Hao Li and 2 more

Abstract read
In one paragraph

Article in Proteomics, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Jiamin HuState Key Laboratory of Oncology in South China, Collaborative Innovation Center for Cancer Medicine, Guangdong Provincial Clinical Research Center for Cancer, Sun Yat-sen University Cancer Center, Guangzhou, China.
Yongqiang ZhengState Key Laboratory of Oncology in South China, Collaborative Innovation Center for Cancer Medicine, Guangdong Provincial Clinical Research Center for Cancer, Sun Yat-sen University Cancer Center, Guangzhou, China.
Xin HuangState Key Laboratory of Oncology in South China, Collaborative Innovation Center for Cancer Medicine, Guangdong Provincial Clinical Research Center for Cancer, Sun Yat-sen University Cancer Center, Guangzhou, China.
Zhuoran LiangState Key Laboratory of Oncology in South China, Collaborative Innovation Center for Cancer Medicine, Guangdong Provincial Clinical Research Center for Cancer, Sun Yat-sen University Cancer Center, Guangzhou, China.
Juntong DiState Key Laboratory of Oncology in South China, Collaborative Innovation Center for Cancer Medicine, Guangdong Provincial Clinical Research Center for Cancer, Sun Yat-sen University Cancer Center, Guangzhou, China.
Bijin CaoState Key Laboratory of Oncology in South China, Collaborative Innovation Center for Cancer Medicine, Guangdong Provincial Clinical Research Center for Cancer, Sun Yat-sen University Cancer Center, Guangzhou, China.
Lulu WangState Key Laboratory of Oncology in South China, Collaborative Innovation Center for Cancer Medicine, Guangdong Provincial Clinical Research Center for Cancer, Sun Yat-sen University Cancer Center, Guangzhou, China.
Junteng LiState Key Laboratory of Oncology in South China, Collaborative Innovation Center for Cancer Medicine, Guangdong Provincial Clinical Research Center for Cancer, Sun Yat-sen University Cancer Center, Guangzhou, China.
Zhe FuState Key Laboratory of Oncology in South China, Collaborative Innovation Center for Cancer Medicine, Guangdong Provincial Clinical Research Center for Cancer, Sun Yat-sen University Cancer Center, Guangzhou, China.
Hao LiState Key Laboratory of Oncology in South China, Collaborative Innovation Center for Cancer Medicine, Guangdong Provincial Clinical Research Center for Cancer, Sun Yat-sen University Cancer Center, Guangzhou, China.
Han ChengSchool of Life Sciences, Zhengzhou University, Zhengzhou, China.
Ze-Xian LiuState Key Laboratory of Oncology in South China, Collaborative Innovation Center for Cancer Medicine, Guangdong Provincial Clinical Research Center for Cancer, Sun Yat-sen University Cancer Center, Guangzhou, China.

Funding

Fostering Fund of Fundamental Research for Young Teachers of Zhengzhou University JC21343016Guangdong Esophageal Cancer Institute Science and Technology Program M202503National Key R&D Program of China 2021YFA1302100National Natural Science Foundation of China 32370698National Natural Science Foundation of China 62476253Young Talents Program of Sun Yat-sen University Cancer Center YTP-SYSUCC-0029
6 · The paper itself

Abstract

Research advancements made in the last decade have shed light on the dysregulation of cellular mechanisms that lead to aberrant and pathologic intron retention (IR). IR is not merely a mechanism of gene regulation but may also play a potential role in cancer pathogenesis and therapeutic resistance across various human cancers. Despite its potential significance, there remains a notable gap in comprehensive database resources for introns within tumors. Therefore, we investigated whether the retained introns contain undiscovered protein-coding ORFs and whether they can encode proteins. We conducted a genome-wide search for underlying translatable intron ORFs (iORFs) and validated them at the protein level via large-scale proteomic mass spectrometry (MS) data. Furthermore, we developed the first comprehensive resource, iMPI (an integrative database for MicroProteins encoded by introns), to provide an accessible source of iORF-encoded microproteins. Our genome-wide search identified 209,091 introns in the human GRCh38 genome, among which 15,975 were confirmed as candidates with strong coding potential. On the basis of the proteomic MS search, 4751 introns containing a total of 5823 iORFs across 27 cancer types were validated. Detailed annotations, including intron information, coding evidence, subcellular location and structures, were integrated. iMPI is a user-friendly web interface that is freely available at https://impi.omicsbio.info/, making it a valuable tool for researchers investigating the spectrum of IR in human cancers.

Indexed as

Databases, ProteinIntronsNeoplasmsBiocurationHumansMicropeptidesOpen Reading FramesProteomicsMicropeptidesalternative splicingbiological databasecancercoding potentialintron retention

Identifiers

PMID42113741
PMCPMC13519386

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.