Evidence map›Paper›PMID 42113462›Full record

ArticleInfection2026

Transmitted HIV-1 drug resistance and subtype distribution among treatment-naïve individuals at a tertiary referral centre in the Aegean Region of Türkiye: an eight-year cohort study.

İlker Ödemiş, İlkay Akbulut, Esra Duru Öz, Ahmet Can Harput, Büşra Yaren Özcan, Tülin Demir, Sabri Atalay

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Article in Infection, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

7 authors.

İlker ÖdemişDepartment of Infectious Diseases and Clinical Microbiology, Tepecik Training and Research Hospital, University of Health Sciences, Izmir, Türkiye. ilkerodemis2014@gmail.com.ORCID http://orcid.org/0000-0003-2638-0163
İlkay AkbulutDepartment of Infectious Diseases and Clinical Microbiology, Tepecik Training and Research Hospital, University of Health Sciences, Izmir, Türkiye.ORCID http://orcid.org/0000-0002-4840-6865
Esra Duru ÖzDepartment of Infectious Diseases and Clinical Microbiology, Tepecik Training and Research Hospital, University of Health Sciences, Izmir, Türkiye.ORCID http://orcid.org/0000-0001-6286-8858
Ahmet Can HarputDepartment of Infectious Diseases and Clinical Microbiology, Tepecik Training and Research Hospital, University of Health Sciences, Izmir, Türkiye.ORCID http://orcid.org/0009-0003-6634-8528
Büşra Yaren ÖzcanDepartment of Infectious Diseases and Clinical Microbiology, Tepecik Training and Research Hospital, University of Health Sciences, Izmir, Türkiye.ORCID http://orcid.org/0009-0003-8301-3543
Tülin DemirDepartment of Medical Microbiology, School Of Medicine, Ahi Evran University, Kırşehir, Türkiye.ORCID http://orcid.org/0000-0003-2708-2838
Sabri AtalayDepartment of Infectious Diseases and Clinical Microbiology, Tepecik Training and Research Hospital, University of Health Sciences, Izmir, Türkiye.ORCID http://orcid.org/0000-0001-9076-428X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeTransmitted drug resistance (TDR) threatens the effectiveness of first-line antiretroviral therapy, yet contemporary regional data from the Aegean region of Türkiye remain limited. This study evaluated TDR prevalence, mutational profiles, and HIV-1 subtype distribution among treatment-naïve individuals.

methodsWe conducted a single-center retrospective cohort study at a tertiary referral center in İzmir, Türkiye, including adults with confirmed HIV-1 infection who were antiretroviral-naïve at baseline between January 2017 and December 2024. Genotypic resistance testing was performed before treatment initiation using Sanger sequencing. Resistance mutations were interpreted with Stanford HIVdb v10.1, and TDR was defined as a penalty score of ≥ 10 for at least one drug.

resultsA total of 163 individuals were included; the mean age was 38.16 ± 12.48 years, 91.4% were male, and subtype B was the most common clade (50.3%). Overall, 29 individuals (17.8%) had at least one resistance-associated mutation. NNRTI resistance predominated (15.3%), followed by NRTI (1.8%) and PI (0.6%); no INSTI mutations were detected. HIV-1 subtype F remained independently associated with antiretroviral resistance in multivariable logistic regression (OR 31.4, 95% CI 6.10-335.1; p < 0.001). E138A was the most common NNRTI substitution (7.4%). S68G was the most frequent accessory mutation, identified in 41.7% of patients.

conclusionTransmitted drug resistance remains clinically relevant in treatment-naïve individuals in the Aegean region of Türkiye and is driven predominantly by NNRTI-associated mutations. The absence of baseline INSTI resistance supports the preserved activity of contemporary INSTI-based first-line regimens, while the observed association between subtype F and resistance warrants further molecular surveillance.

Indexed as

Anti-HIV AgentsDrug Resistance, ViralHIV-1HIV InfectionsAdultCohort StudiesFemaleGenotypeHumansMaleMiddle AgedMutationPrevalenceRetrospective StudiesTertiary Care CentersTurkeyAnti-HIV AgentsAntiretroviral resistance mutationsHIV-1 subtype distributionHIV-1 transmitted drug resistanceIntegrase strand transfer inhibitor resistanceNNRTI resistanceTürkiye

Identifiers

PMID42113462
PMCPMC13476345

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.