Evidence map›Paper›PMID 42108631›Full record

ReviewBriefings in bioinformatics2026

Toward trustworthy artificial intelligence in multi-omics: a review of reproducibility, stability, and interpretability.

Thanh Hoa Vo, Nguyen Quoc Khanh Le

Abstract readReview
In one paragraph

Review in Briefings in bioinformatics, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Thanh Hoa VoDepartment of Science, South East Technological University, Cork Road, Waterford City, Co. Waterford, X91 K0EK, Ireland.
Nguyen Quoc Khanh LeAIBioMed Research Group, Taipei Medical University, No. 250 Wuxing St., Xinyi Dist., Taipei 110, Taiwan.ORCID 0000-0002-5521-727X

Funding

National Science and Technology Council, Taiwan NSTC114-2221-E-038-015NSTC International Internship Pilot Program (IIPP) 2024
6 · The paper itself

Abstract

The integration of multi-omics data has become increasingly important in advancing precision medicine and systems biology. However, the reliability and trustworthiness of artificial intelligence (AI) models applied to such data remain critical concerns. This review examines the evolution and current landscape of reproducibility, stability, and interpretability in AI-driven multi-omics analysis. We explore these three pillars of trustworthiness in recent literature, with a particular focus on methodological innovations, benchmarking practices, and biological relevance. Drawing from key publications, including those featured in Briefings in Bioinformatics, we highlight emerging frameworks that aim to make multi-omics models more robust, transparent, and translationally meaningful. We advocate for routine adoption of TRUST-aligned evaluation practices, including structured stability assessments, multi-cohort benchmarking, and standardized model-card reporting, as default components of future multi-omics AI development. We conclude by outlining key challenges and future directions for developing trustworthy AI systems capable of supporting reproducible, interpretable, and clinically meaningful multi-omics research.

Indexed as

Artificial IntelligenceComputational BiologyMultiomicsHumansPrecision MedicineReproducibility of ResultsSystems Biologyinterpretabilitymulti-omicsprecision medicinereproducibilitystabilitytrustworthy AI

Identifiers

PMID42108631
PMCPMC13158125

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.