ArticleScientific data2026
Haplotype-resolved chromosome-level genome assemblies of the deep-sea annelid Lindaspio polybranchiata.
Article in Scientific data, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.
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Abstract
Lindaspio polybranchiata is a deep-sea spionid annelid and an early colonizer of cold seep ecosystems, but genomic resources for this genus remain limited. Here, we present haplotype-resolved chromosome-level genome assemblies for L. polybranchiata generated using PacBio HiFi, Illumina, Hi-C, and RNA-seq data. The phased assembly comprises two haplotypes, A and B, with genome sizes of 1.72 Gb and 1.38 Gb, scaffold N50 values of 76.1 Mb and 71.0 Mb, and 81.5% and 92.8% of sequences anchored to 18 pseudochromosomes, respectively. BUSCO completeness reached 91.2% for haplotype A and 91.7% for haplotype B. We predicted 22,322 protein-coding genes in haplotype A and 19,587 in haplotype B, of which 88.80% and 85.21% were functionally annotated, respectively. These genome resources provide a foundation for studies of chromosome organization, comparative genomics, deep-sea adaptation, and the evolution of Lindaspio and related spionid annelids.
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