Evidence map›Paper›PMID 42106329›Full record

ArticleNature communications2026

A tissue-intrinsic mechanism sensitizes HIV-1 particles for TLR-triggered innate immune responses.

Samy Sid Ahmed, Liv Zimmermann, Andrea Imle, Katrin Wuebben, Nadine Tibroni, Lena Rauch-Wirth, Jan Münch, Petr Chlanda, Frederik Graw, Oliver T Fackler

Abstract read
In one paragraph

Article in Nature communications, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Samy Sid AhmedDepartment of Infectious Diseases, Integrative Virology, CIID, Heidelberg University, Medical Faculty Heidelberg, Heidelberg, Germany.
Liv ZimmermannSchaller Research Groups, Department of Infectious Diseases, Virology, Heidelberg University, Medical Faculty Heidelberg, Heidelberg, Germany.ORCID 0000-0003-0651-8460
Andrea ImleDepartment of Infectious Diseases, Integrative Virology, CIID, Heidelberg University, Medical Faculty Heidelberg, Heidelberg, Germany.ORCID 0000-0002-8740-1477
Katrin WuebbenBioQuant-Center for Quantitative Biology, Heidelberg University, Heidelberg, Germany.
Nadine TibroniDepartment of Infectious Diseases, Integrative Virology, CIID, Heidelberg University, Medical Faculty Heidelberg, Heidelberg, Germany.
Lena Rauch-WirthInstitute of Molecular Virology, Ulm University Medical Center, Ulm, Germany.ORCID 0000-0002-0952-3559
Jan MünchInstitute of Molecular Virology, Ulm University Medical Center, Ulm, Germany.ORCID 0000-0001-7316-7141
Petr ChlandaSchaller Research Groups, Department of Infectious Diseases, Virology, Heidelberg University, Medical Faculty Heidelberg, Heidelberg, Germany.ORCID 0000-0002-7782-2139
Frederik GrawBioQuant-Center for Quantitative Biology, Heidelberg University, Heidelberg, Germany.ORCID 0000-0002-1198-6632
Oliver T FacklerDepartment of Infectious Diseases, Integrative Virology, CIID, Heidelberg University, Medical Faculty Heidelberg, Heidelberg, Germany. oliver.fackler@med.uni-heidelberg.de.ORCID 0000-0003-2982-4209

Funding

Bundesministerium für Bildung und Forschung (Federal Ministry of Education and Research) 031L0293A/EDeutsche Forschungsgemeinschaft (German Research Foundation) 240245660Deutsche Forschungsgemeinschaft (German Research Foundation) 316249678Deutsche Forschungsgemeinschaft (German Research Foundation) EXC 3018/1
6 · The paper itself

Abstract

In vivo, HIV-1 replicates within tissues, yet the impact of three-dimensional (3D) environments on viral spread remains unclear. Our laboratory previously showed that collagen-rich 3D extracellular matrix (ECM) imposes an Environmental Restriction to cell-free Virus Infectivity (ERVI). Here, we demonstrate that ERVI is mediated by adhesive ECM components assembled into tissue-like scaffolds. Transient interactions with collagen fibers rapidly diminish virion infectivity across diverse primary strains by impairing virus fusogenicity. Notably, collagen-experienced particles also induce a distinct antiviral transcriptional program and strong pro-inflammatory cytokine secretion in monocyte-derived macrophages. Mechanistically, collagen contact induces conformational changes in the viral glycoprotein Env, enhances its interaction with toll-like receptor 2 (TLR2), and promotes trafficking into TLR8-positive endosomes, thereby amplifying innate immune sensing. Thus, ERVI functions through a dual mechanism: reducing virion fusogenicity while increasing innate immune detection. These findings identify the biophysical properties of the ECM as a tissue-intrinsic arm of antiviral innate immunity.

Indexed as

HIV-1HIV InfectionsImmunity, InnateToll-Like Receptor 2VirionCollagenEndosomesenv Gene Products, Human Immunodeficiency VirusExtracellular MatrixHumansInnate Immunity RecognitionMacrophagesToll-Like Receptor 8Collagenenv Gene Products, Human Immunodeficiency VirusTLR2 protein, humanToll-Like Receptor 2Toll-Like Receptor 8

Identifiers

PMID42106329
PMCPMC13157497

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.